Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021622388.2 |
| length | 739 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 7 |
| gene id | LOC110536674 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 18446080 ~ 18456914 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02883 | RP-L18e, RPL18; large subunit ribosomal protein L18e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU137084 | lncRNA | upstream | 12382 | 18427731 ~ 18433698 (+) | False | LOC110534321 |
| TU137086 | lncRNA | upstream | 12382 | 18427731 ~ 18433698 (+) | False | LOC110534321 |
| TU137087 | lncRNA | upstream | 12382 | 18427731 ~ 18433698 (+) | False | LOC110534321 |
| TU137088 | lncRNA | upstream | 12382 | 18427731 ~ 18433698 (+) | True | LOC110534321 |
| TU136122 | lncRNA | upstream | 113451 | 18304595 ~ 18332629 (+) | True | LOC110536604 |
| TU137221 | lncRNA | downstream | 20388 | 18477302 ~ 18481741 (+) | True | LOC110536658 |
| TU137237 | lncRNA | downstream | 25896 | 18482810 ~ 18483250 (+) | True | G119026 |
| TU137268 | lncRNA | downstream | 82093 | 18539007 ~ 18539206 (+) | True | G119053 |
| TU137270 | lncRNA | downstream | 82682 | 18539596 ~ 18540230 (+) | True | G119054 |
| TU137227 | lncRNA | downstream | 84100 | 18541014 ~ 18561243 (+) | True | G119016 |
| XM_021622383.2 | mRNA | upstream | 6498 | 18437073 ~ 18439582 (+) | False | si:ch211-120k19.1 |
| XM_021622377.2 | mRNA | upstream | 6498 | 18437082 ~ 18439582 (+) | False | si:ch211-120k19.1 |
| XM_021622371.2 | mRNA | upstream | 6498 | 18437159 ~ 18439582 (+) | False | si:ch211-120k19.1 |
| XM_021622368.2 | mRNA | upstream | 6498 | 18437160 ~ 18439582 (+) | True | si:ch211-120k19.1 |
| XM_036940353.1 | mRNA | upstream | 12382 | 18349751 ~ 18433698 (+) | False | LOC110534321 |
| XM_036940404.1 | mRNA | downstream | 370 | 18457284 ~ 18478772 (+) | False | LOC110536658 |
| XM_021622389.2 | mRNA | downstream | 28168 | 18485082 ~ 18493053 (+) | False | LOC110536690 |
| XM_036940418.1 | mRNA | downstream | 29156 | 18486070 ~ 18493053 (+) | True | LOC110536690 |
| XM_036940438.1 | mRNA | downstream | 67374 | 18524288 ~ 18538706 (+) | False | LOC110536732 |
| XM_036940446.1 | mRNA | downstream | 67374 | 18524288 ~ 18538706 (+) | False | LOC110536732 |
| TU135495 | other | upstream | 988058 | 17455765 ~ 17458022 (+) | True | G117735 |
| TU135611 | other | upstream | 1024420 | 17410632 ~ 17421660 (+) | False | LOC110520798 |
| TU135623 | other | upstream | 1024420 | 17410632 ~ 17421660 (+) | False | LOC110520798 |
| TU135631 | other | upstream | 1036793 | 17400013 ~ 17409287 (+) | False | LOC110520798 |
| TU135467 | other | upstream | 1372379 | 17073201 ~ 17073701 (+) | True | G117714 |
| TU137226 | other | downstream | 444 | 18457358 ~ 18476354 (+) | False | LOC110536658 |
| TU137225 | other | downstream | 19510 | 18476424 ~ 18477134 (+) | False | LOC110536658 |
| TU137398 | other | downstream | 176925 | 18633839 ~ 18636041 (+) | True | G119153 |
| TU137405 | other | downstream | 213599 | 18670513 ~ 18672320 (+) | True | G119160 |
| TU137542 | other | downstream | 502222 | 18959136 ~ 18961465 (+) | False | G119245 |
