Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021623354.2 |
| length | 1151 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 8 |
| gene id | LOC110537365 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20197023 ~ 20201032 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K11346 | ING4; inhibitor of growth protein 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU138748 | lncRNA | upstream | 11609 | 20185173 ~ 20185414 (+) | True | LOC110537348 |
| TU138730 | lncRNA | upstream | 22536 | 20173740 ~ 20174487 (+) | False | G120213 |
| TU138731 | lncRNA | upstream | 22536 | 20173740 ~ 20174487 (+) | True | G120213 |
| TU138729 | lncRNA | upstream | 24578 | 20172049 ~ 20172445 (+) | True | G120212 |
| TU138727 | lncRNA | upstream | 26267 | 20170545 ~ 20170756 (+) | True | G120210 |
| TU138686 | lncRNA | downstream | 10424 | 20211456 ~ 20212371 (+) | True | G120184 |
| TU138668 | lncRNA | downstream | 15186 | 20216218 ~ 20223636 (+) | True | LOC110534400 |
| TU138769 | lncRNA | downstream | 67466 | 20268498 ~ 20270723 (+) | True | G120238 |
| TU138786 | lncRNA | downstream | 111368 | 20312400 ~ 20312765 (+) | True | G120254 |
| TU138690 | lncRNA | downstream | 124070 | 20325102 ~ 20326230 (+) | True | G120188 |
| XM_021623329.2 | mRNA | upstream | 165 | 20190285 ~ 20196858 (+) | True | nop2 |
| XM_021623307.2 | mRNA | upstream | 11773 | 20179254 ~ 20185250 (+) | False | LOC110537348 |
| XM_021623314.2 | mRNA | upstream | 12232 | 20179254 ~ 20184791 (+) | False | LOC110537348 |
| XM_036941198.1 | mRNA | upstream | 31136 | 20145710 ~ 20165887 (+) | False | zyx |
| XM_036941196.1 | mRNA | upstream | 31136 | 20146136 ~ 20165887 (+) | False | zyx |
| LOC110534400 | mRNA | downstream | 1111 | 20202143 ~ 20228607 (+) | False | LOC110534400 |
| XR_005039496.1 | mRNA | downstream | 1871 | 20202903 ~ 20203211 (+) | True | LOC118944183 |
| XR_005039495.1 | mRNA | downstream | 3798 | 20204830 ~ 20205130 (+) | True | LOC118944182 |
| XR_005039493.1 | mRNA | downstream | 4708 | 20205740 ~ 20206032 (+) | True | LOC118944180 |
| XR_005039497.1 | mRNA | downstream | 7831 | 20208863 ~ 20209151 (+) | True | LOC118944184 |
| TU138741 | other | upstream | 12398 | 20179408 ~ 20184625 (+) | False | LOC110537348 |
| TU138728 | other | upstream | 25642 | 20171082 ~ 20171381 (+) | True | G120211 |
| TU138669 | other | upstream | 39913 | 20145733 ~ 20157110 (+) | True | zyx |
| TU138600 | other | upstream | 172040 | 20018699 ~ 20024983 (+) | False | casp2 |
| TU138545 | other | upstream | 268546 | 19924072 ~ 19928477 (+) | True | G120059 |
| TU138791 | other | downstream | 118707 | 20319739 ~ 20320256 (+) | True | G120259 |
| TU138671 | other | downstream | 206830 | 20407862 ~ 20419128 (+) | True | G120169 |
| TU139024 | other | downstream | 699242 | 20900274 ~ 20973920 (+) | False | erfl3 |
| TU139026 | other | downstream | 773819 | 20974851 ~ 20976199 (+) | True | erfl3 |
| TU139028 | other | downstream | 790722 | 20991754 ~ 21015891 (+) | True | LOC110509768 |
