Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005039493.1 |
| length | 293 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | LOC118944180 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20205740 ~ 20206032 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU138748 | lncRNA | upstream | 20326 | 20185173 ~ 20185414 (+) | True | LOC110537348 |
| TU138730 | lncRNA | upstream | 31253 | 20173740 ~ 20174487 (+) | False | G120213 |
| TU138731 | lncRNA | upstream | 31253 | 20173740 ~ 20174487 (+) | True | G120213 |
| TU138729 | lncRNA | upstream | 33295 | 20172049 ~ 20172445 (+) | True | G120212 |
| TU138727 | lncRNA | upstream | 34984 | 20170545 ~ 20170756 (+) | True | G120210 |
| TU138686 | lncRNA | downstream | 5424 | 20211456 ~ 20212371 (+) | True | G120184 |
| TU138668 | lncRNA | downstream | 10186 | 20216218 ~ 20223636 (+) | True | LOC110534400 |
| TU138769 | lncRNA | downstream | 62466 | 20268498 ~ 20270723 (+) | True | G120238 |
| TU138786 | lncRNA | downstream | 106368 | 20312400 ~ 20312765 (+) | True | G120254 |
| TU138690 | lncRNA | downstream | 119070 | 20325102 ~ 20326230 (+) | True | G120188 |
| XR_005039495.1 | mRNA | upstream | 610 | 20204830 ~ 20205130 (+) | True | LOC118944182 |
| XR_005039496.1 | mRNA | upstream | 2529 | 20202903 ~ 20203211 (+) | True | LOC118944183 |
| XM_021623354.2 | mRNA | upstream | 4708 | 20197023 ~ 20201032 (+) | True | LOC110537365 |
| XM_021623329.2 | mRNA | upstream | 8882 | 20190285 ~ 20196858 (+) | True | nop2 |
| XM_021623307.2 | mRNA | upstream | 20490 | 20179254 ~ 20185250 (+) | False | LOC110537348 |
| XR_005039497.1 | mRNA | downstream | 2831 | 20208863 ~ 20209151 (+) | True | LOC118944184 |
| XM_036990250.1 | mRNA | downstream | 21589 | 20227621 ~ 20232135 (+) | False | cnp-1-2 |
| XM_036990256.1 | mRNA | downstream | 21595 | 20227627 ~ 20232135 (+) | False | cnp-1-2 |
| NM_001124210.1 | mRNA | downstream | 21814 | 20227846 ~ 20232215 (+) | True | cnp-1-2 |
| XM_021623341.2 | mRNA | downstream | 37398 | 20243430 ~ 20249298 (+) | True | LOC100329212 |
| TU138741 | other | upstream | 21115 | 20179408 ~ 20184625 (+) | False | LOC110537348 |
| TU138728 | other | upstream | 34359 | 20171082 ~ 20171381 (+) | True | G120211 |
| TU138669 | other | upstream | 48630 | 20145733 ~ 20157110 (+) | True | zyx |
| TU138600 | other | upstream | 180757 | 20018699 ~ 20024983 (+) | False | casp2 |
| TU138545 | other | upstream | 277263 | 19924072 ~ 19928477 (+) | True | G120059 |
| TU138791 | other | downstream | 113707 | 20319739 ~ 20320256 (+) | True | G120259 |
| TU138671 | other | downstream | 201830 | 20407862 ~ 20419128 (+) | True | G120169 |
| TU139024 | other | downstream | 694242 | 20900274 ~ 20973920 (+) | False | erfl3 |
| TU139026 | other | downstream | 768819 | 20974851 ~ 20976199 (+) | True | erfl3 |
| TU139028 | other | downstream | 785722 | 20991754 ~ 21015891 (+) | True | LOC110509768 |
