Item | Value |
---|---|
RNA id | NM_001124210.1 |
length | 1130 |
RNA type | mRNA |
GC content | 0.47 |
exon number | 3 |
gene id | cnp-1-2 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 20227621 ~ 20232215 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
id | name | namespace |
---|---|---|
GO:0005576 | extracellular region | cellular_component |
GO:0005179 | hormone activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU138668 | lncRNA | upstream | 4210 | 20216218 ~ 20223636 (+) | True | LOC110534400 |
TU138686 | lncRNA | upstream | 15475 | 20211456 ~ 20212371 (+) | True | G120184 |
TU138748 | lncRNA | upstream | 42432 | 20185173 ~ 20185414 (+) | True | LOC110537348 |
TU138730 | lncRNA | upstream | 53359 | 20173740 ~ 20174487 (+) | False | G120213 |
TU138769 | lncRNA | downstream | 36283 | 20268498 ~ 20270723 (+) | True | G120238 |
TU138786 | lncRNA | downstream | 80185 | 20312400 ~ 20312765 (+) | True | G120254 |
TU138690 | lncRNA | downstream | 92887 | 20325102 ~ 20326230 (+) | True | G120188 |
TU138795 | lncRNA | downstream | 108759 | 20340974 ~ 20341290 (+) | True | G120263 |
TU138800 | lncRNA | downstream | 122523 | 20354738 ~ 20355147 (+) | True | G120268 |
XR_005039497.1 | mRNA | upstream | 18695 | 20208863 ~ 20209151 (+) | True | LOC118944184 |
XR_005039493.1 | mRNA | upstream | 21814 | 20205740 ~ 20206032 (+) | True | LOC118944180 |
XR_005039495.1 | mRNA | upstream | 22716 | 20204830 ~ 20205130 (+) | True | LOC118944182 |
XR_005039496.1 | mRNA | upstream | 24635 | 20202903 ~ 20203211 (+) | True | LOC118944183 |
XM_021623354.2 | mRNA | upstream | 26814 | 20197023 ~ 20201032 (+) | True | LOC110537365 |
XM_021623341.2 | mRNA | downstream | 11215 | 20243430 ~ 20249298 (+) | True | LOC100329212 |
XM_036941236.1 | mRNA | downstream | 18074 | 20250289 ~ 20259650 (+) | False | opn9 |
XM_021623368.2 | mRNA | downstream | 18380 | 20250595 ~ 20259650 (+) | True | opn9 |
XM_036941250.1 | mRNA | downstream | 27600 | 20259815 ~ 20292954 (+) | False | LOC110537377 |
XM_036941241.1 | mRNA | downstream | 27600 | 20259815 ~ 20297138 (+) | False | LOC110537377 |
TU138741 | other | upstream | 43221 | 20179408 ~ 20184625 (+) | False | LOC110537348 |
TU138728 | other | upstream | 56465 | 20171082 ~ 20171381 (+) | True | G120211 |
TU138669 | other | upstream | 70736 | 20145733 ~ 20157110 (+) | True | zyx |
TU138600 | other | upstream | 202863 | 20018699 ~ 20024983 (+) | False | casp2 |
TU138545 | other | upstream | 299369 | 19924072 ~ 19928477 (+) | True | G120059 |
TU138791 | other | downstream | 87524 | 20319739 ~ 20320256 (+) | True | G120259 |
TU138671 | other | downstream | 175647 | 20407862 ~ 20419128 (+) | True | G120169 |
TU139024 | other | downstream | 668059 | 20900274 ~ 20973920 (+) | False | erfl3 |
TU139026 | other | downstream | 742636 | 20974851 ~ 20976199 (+) | True | erfl3 |
TU139028 | other | downstream | 759539 | 20991754 ~ 21015891 (+) | True | LOC110509768 |