Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021624444.2 |
| length | 919 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 5 |
| gene id | LOC110537956 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22381333 ~ 22384757 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU141180 | lncRNA | upstream | 6683 | 22373992 ~ 22374650 (+) | True | G122225 |
| TU141087 | lncRNA | upstream | 65275 | 22314445 ~ 22316058 (+) | True | G122135 |
| TU141003 | lncRNA | upstream | 208282 | 22172712 ~ 22173051 (+) | True | G122065 |
| TU141027 | lncRNA | upstream | 279051 | 22102015 ~ 22102282 (+) | True | G122077 |
| TU140940 | lncRNA | upstream | 357000 | 22019275 ~ 22024333 (+) | True | arhgef1b |
| TU141198 | lncRNA | downstream | 27104 | 22411861 ~ 22412408 (+) | True | G122242 |
| TU141217 | lncRNA | downstream | 45053 | 22429810 ~ 22431364 (+) | False | G122256 |
| TU141216 | lncRNA | downstream | 45690 | 22430447 ~ 22431364 (+) | True | G122256 |
| TU141290 | lncRNA | downstream | 189360 | 22574117 ~ 22578051 (+) | True | G122325 |
| TU141296 | lncRNA | downstream | 195747 | 22580504 ~ 22583666 (+) | True | G122330 |
| NM_001124260.1 | mRNA | upstream | 3183 | 22376139 ~ 22378150 (+) | True | apoc2 |
| XM_021624431.2 | mRNA | upstream | 25266 | 22352969 ~ 22356067 (+) | True | LOC110537948 |
| XM_021624406.2 | mRNA | upstream | 31397 | 22348543 ~ 22349936 (+) | False | apoc4 |
| XM_021624419.2 | mRNA | upstream | 34799 | 22342491 ~ 22346534 (+) | False | LOC110537939 |
| XM_021624394.2 | mRNA | upstream | 44626 | 22332292 ~ 22336707 (+) | True | LOC110537922 |
| XM_036961789.1 | mRNA | downstream | 5974 | 22390731 ~ 22392179 (+) | True | LOC118944072 |
| XM_021624473.2 | mRNA | downstream | 111364 | 22496121 ~ 22544404 (+) | False | LOC110537974 |
| XM_036942454.1 | mRNA | downstream | 145202 | 22529959 ~ 22544404 (+) | False | LOC110537974 |
| XM_021624466.2 | mRNA | downstream | 149278 | 22534035 ~ 22544404 (+) | True | LOC110537974 |
| XM_021625029.2 | mRNA | downstream | 469982 | 22854739 ~ 22856678 (+) | True | LOC110538298 |
| TU141081 | other | upstream | 31397 | 22348583 ~ 22349936 (+) | True | apoc4 |
| TU141079 | other | upstream | 34718 | 22342527 ~ 22346615 (+) | False | LOC110537939 |
| TU141080 | other | upstream | 34828 | 22342527 ~ 22346505 (+) | True | LOC110537939 |
| TU140958 | other | upstream | 362518 | 22016662 ~ 22018815 (+) | False | G122030 |
| TU140829 | other | upstream | 556239 | 21821214 ~ 21825094 (+) | True | LOC110537735 |
| TU141439 | other | downstream | 426010 | 22810767 ~ 22811263 (+) | True | G122459 |
| TU143220 | other | downstream | 1439936 | 23824693 ~ 23825502 (+) | True | G123980 |
| TU143245 | other | downstream | 1477160 | 23861917 ~ 23881636 (+) | False | LOC110538497 |
| TU143247 | other | downstream | 1477160 | 23861917 ~ 23881636 (+) | True | LOC110538497 |
| TU143372 | other | downstream | 1762104 | 24146861 ~ 24148593 (+) | True | G124121 |
