Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036942828.1 |
| length | 1114 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 7 |
| gene id | LOC110538364 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 23252834 ~ 23255257 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| K09632 | CTRL; chymotrypsin-like protease |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU141699 | lncRNA | upstream | 53581 | 23185691 ~ 23199253 (+) | True | G122667 |
| TU141666 | lncRNA | upstream | 112290 | 23140052 ~ 23140544 (+) | True | G122637 |
| TU141661 | lncRNA | upstream | 124908 | 23127682 ~ 23127926 (+) | True | G122632 |
| TU141632 | lncRNA | upstream | 133860 | 23118185 ~ 23118974 (+) | True | kcnn4 |
| TU141659 | lncRNA | upstream | 135626 | 23116765 ~ 23117208 (+) | True | G122630 |
| TU142635 | lncRNA | downstream | 3562 | 23258819 ~ 23259033 (+) | True | G123471 |
| TU142637 | lncRNA | downstream | 5079 | 23260336 ~ 23260565 (+) | True | G123473 |
| TU142630 | lncRNA | downstream | 12107 | 23267364 ~ 23268261 (+) | False | LOC110534494 |
| TU142629 | lncRNA | downstream | 15531 | 23270788 ~ 23277132 (+) | True | LOC110534494 |
| TU142627 | lncRNA | downstream | 24882 | 23280139 ~ 23281470 (+) | False | G123464 |
| XM_021624823.2 | mRNA | upstream | 969 | 23246552 ~ 23251865 (+) | True | hsc70 |
| XM_036942760.1 | mRNA | upstream | 6901 | 23236220 ~ 23245933 (+) | True | si:dkey-238d18.4 |
| XM_021625084.2 | mRNA | upstream | 100943 | 23148505 ~ 23151891 (+) | True | LOC110538332 |
| XM_021624878.2 | mRNA | upstream | 116979 | 23128236 ~ 23135855 (+) | False | LOC110538208 |
| LOC110538320 | mRNA | downstream | 5846 | 23261103 ~ 23261862 (+) | True | LOC110538320 |
| XR_005039445.1 | mRNA | downstream | 11902 | 23267159 ~ 23276092 (+) | False | LOC110534494 |
| XM_021624580.2 | mRNA | downstream | 27307 | 23282564 ~ 23343892 (+) | False | LOC110538034 |
| XM_036942559.1 | mRNA | downstream | 27307 | 23282564 ~ 23343892 (+) | False | LOC110538034 |
| XM_036942566.1 | mRNA | downstream | 27307 | 23282564 ~ 23343892 (+) | False | LOC110538034 |
| TU141439 | other | upstream | 441571 | 22810767 ~ 22811263 (+) | True | G122459 |
| TU141081 | other | upstream | 902898 | 22348583 ~ 22349936 (+) | True | apoc4 |
| TU141079 | other | upstream | 906219 | 22342527 ~ 22346615 (+) | False | LOC110537939 |
| TU141080 | other | upstream | 906329 | 22342527 ~ 22346505 (+) | True | LOC110537939 |
| TU140958 | other | upstream | 1234019 | 22016662 ~ 22018815 (+) | False | G122030 |
| TU143220 | other | downstream | 569436 | 23824693 ~ 23825502 (+) | True | G123980 |
| TU143245 | other | downstream | 606660 | 23861917 ~ 23881636 (+) | False | LOC110538497 |
| TU143247 | other | downstream | 606660 | 23861917 ~ 23881636 (+) | True | LOC110538497 |
| TU143372 | other | downstream | 891604 | 24146861 ~ 24148593 (+) | True | G124121 |
| TU143399 | other | downstream | 1285747 | 24541004 ~ 24544226 (+) | False | LOC110538915 |
