RNA id: trnar-acg-2



Basic Information


Item Value
RNA id trnar-acg-2
length 73
RNA type mRNA
GC content 0.56
exon number 1
gene id trnar-acg-2
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26641167 ~ 26641239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGGctagtggcgcaatggataacgcgtctgactacggatcagaagattctaggttcgactcctggctagCTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU146224 lncRNA upstream 77825 26563047 ~ 26563342 (+) True G126695
TU146223 lncRNA upstream 79159 26561498 ~ 26562008 (+) True G126694
TU146190 lncRNA upstream 82531 26558016 ~ 26558636 (+) True G126664
TU146206 lncRNA upstream 114131 26525778 ~ 26527036 (+) True G126679
TU146286 lncRNA downstream 18773 26660012 ~ 26661367 (+) True G126748
TU146749 lncRNA downstream 119203 26760442 ~ 26761528 (+) True G127165
TU146774 lncRNA downstream 150789 26792028 ~ 26792291 (+) True G127188
TU146795 lncRNA downstream 184073 26825312 ~ 26825904 (+) True G127202
TU146802 lncRNA downstream 187009 26828248 ~ 26828451 (+) True G127209
XM_036943660.1 mRNA upstream 27730 26596265 ~ 26613437 (+) True LOC110539196
XM_021626146.2 mRNA upstream 55726 26581768 ~ 26585441 (+) True LOC110539212
XM_021626143.2 mRNA upstream 59371 26579758 ~ 26581796 (+) True LOC110539182
XM_021626136.2 mRNA upstream 93664 26452681 ~ 26547503 (+) True LOC110539173
XM_021626115.2 mRNA upstream 314272 26323007 ~ 26326895 (+) True fzd1
XM_036943668.1 mRNA downstream 97685 26738924 ~ 26741780 (+) True LOC110485091
XM_021556142.2 mRNA downstream 105732 26746971 ~ 26765817 (+) True LOC110485092
NM_001160642.2 mRNA downstream 129225 26770464 ~ 26779479 (+) True rwdd1
XM_021556171.2 mRNA downstream 172245 26813484 ~ 26823336 (+) True LOC110485096
XM_021556215.2 mRNA downstream 256690 26897929 ~ 26903411 (+) False LOC110485145
TU146263 other upstream 12518 26626849 ~ 26628649 (+) True G126727
TU145896 other upstream 591063 26049850 ~ 26050104 (+) True G126387
TU145423 other upstream 883314 25682880 ~ 25757853 (+) True G125934
TU144043 other upstream 1258855 25377484 ~ 25382312 (+) True LOC110534557
TU143765 other upstream 1767333 24873051 ~ 24873834 (+) True G124451
TU146777 other downstream 152971 26794210 ~ 26795762 (+) True G127190
TU146788 other downstream 216459 26857698 ~ 26861242 (+) False G127198
TU147247 other downstream 506937 27148176 ~ 27160645 (+) True LOC110485212
TU147273 other downstream 548752 27189991 ~ 27190593 (+) True G127644
TU147350 other downstream 660839 27302078 ~ 27303555 (+) True LOC110485466

Expression Profile