Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU148168 |
| length | 747 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 1 |
| gene id | LOC110485682 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 28165160 ~ 28171323 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU148155 | lncRNA | upstream | 29669 | 28140278 ~ 28140905 (+) | True | G128459 |
| TU148134 | lncRNA | upstream | 77576 | 28092418 ~ 28092998 (+) | True | G128438 |
| TU148126 | lncRNA | upstream | 85794 | 28084168 ~ 28084780 (+) | False | G128431 |
| TU148127 | lncRNA | upstream | 85794 | 28084370 ~ 28084780 (+) | True | G128431 |
| TU148124 | lncRNA | upstream | 85918 | 28084370 ~ 28084656 (+) | False | G128431 |
| TU148171 | lncRNA | downstream | 9362 | 28180682 ~ 28181001 (+) | True | G128474 |
| TU148195 | lncRNA | downstream | 76117 | 28247437 ~ 28250761 (+) | True | ddr1 |
| TU148246 | lncRNA | downstream | 92874 | 28264194 ~ 28265454 (+) | True | G128531 |
| TU148261 | lncRNA | downstream | 133164 | 28304484 ~ 28304997 (+) | True | G128546 |
| TU148264 | lncRNA | downstream | 140506 | 28311826 ~ 28382924 (+) | True | G128549 |
| LOC110534576 | mRNA | upstream | 260588 | 27907789 ~ 27909986 (+) | True | LOC110534576 |
| XM_021556734.2 | mRNA | upstream | 492560 | 27651611 ~ 27678014 (+) | False | LOC110485628 |
| XM_036944150.1 | mRNA | upstream | 492560 | 27651987 ~ 27678014 (+) | True | LOC110485628 |
| XR_005036074.1 | mRNA | upstream | 492838 | 27651611 ~ 27677736 (+) | False | LOC110485628 |
| XM_036944088.1 | mRNA | upstream | 751409 | 27410989 ~ 27419165 (+) | True | LOC110485563 |
| XM_021556776.2 | mRNA | downstream | 526 | 28171846 ~ 28180205 (+) | False | LOC110485672 |
| XM_021556787.2 | mRNA | downstream | 845 | 28172165 ~ 28180205 (+) | True | LOC110485672 |
| XM_036944288.1 | mRNA | downstream | 23242 | 28194562 ~ 28247967 (+) | False | ddr1 |
| XM_036944289.1 | mRNA | downstream | 23242 | 28194562 ~ 28247967 (+) | False | ddr1 |
| XM_036944293.1 | mRNA | downstream | 23242 | 28194562 ~ 28247967 (+) | False | ddr1 |
| TU148132 | other | upstream | 81129 | 28088647 ~ 28089445 (+) | True | G128436 |
| TU147867 | other | upstream | 453411 | 27716482 ~ 27717163 (+) | True | G128185 |
| TU147350 | other | upstream | 867019 | 27302078 ~ 27303555 (+) | True | LOC110485466 |
| TU147273 | other | upstream | 979981 | 27189991 ~ 27190593 (+) | True | G127644 |
| TU147247 | other | upstream | 1009929 | 27148176 ~ 27160645 (+) | True | LOC110485212 |
| TU148197 | other | downstream | 79522 | 28250842 ~ 28547915 (+) | True | G128490 |
| TU148570 | other | downstream | 760736 | 28932056 ~ 28944390 (+) | True | LOC110485990 |
| TU148590 | other | downstream | 768579 | 28939899 ~ 28981288 (+) | True | G128853 |
| TU148818 | other | downstream | 1306297 | 29477617 ~ 29478130 (+) | True | LOC110534631 |
| TU148912 | other | downstream | 1313313 | 29484633 ~ 29485130 (+) | True | G129155 |
