Item | Value |
---|---|
RNA id | XM_036933644.1 |
length | 7730 |
RNA type | mRNA |
GC content | 0.52 |
exon number | 11 |
gene id | LOC110485723 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 28281112 ~ 28296740 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
id | description |
---|---|
K20780 | MDC1; mediator of DNA damage checkpoint protein 1 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU148246 | lncRNA | upstream | 15658 | 28264194 ~ 28265454 (+) | True | G128531 |
TU148195 | lncRNA | upstream | 30351 | 28247437 ~ 28250761 (+) | True | ddr1 |
TU148171 | lncRNA | upstream | 100111 | 28180682 ~ 28181001 (+) | True | G128474 |
TU148168 | lncRNA | upstream | 109792 | 28170574 ~ 28171320 (+) | True | LOC110485682 |
TU148155 | lncRNA | upstream | 140207 | 28140278 ~ 28140905 (+) | True | G128459 |
TU148261 | lncRNA | downstream | 7744 | 28304484 ~ 28304997 (+) | True | G128546 |
TU148264 | lncRNA | downstream | 15086 | 28311826 ~ 28382924 (+) | True | G128549 |
TU148276 | lncRNA | downstream | 83042 | 28379782 ~ 28380102 (+) | True | G128561 |
TU148400 | lncRNA | downstream | 271576 | 28568316 ~ 28600609 (+) | True | G128679 |
TU148373 | lncRNA | downstream | 302547 | 28599287 ~ 28644026 (+) | True | G128652 |
XM_021556890.2 | mRNA | upstream | 832 | 28270251 ~ 28280280 (+) | True | LOC110485735 |
XM_036944287.1 | mRNA | upstream | 30346 | 28194563 ~ 28250766 (+) | False | ddr1 |
XM_036944288.1 | mRNA | upstream | 33145 | 28194562 ~ 28247967 (+) | False | ddr1 |
XM_036944289.1 | mRNA | upstream | 33145 | 28194562 ~ 28247967 (+) | False | ddr1 |
XM_036944293.1 | mRNA | upstream | 33145 | 28194562 ~ 28247967 (+) | False | ddr1 |
XM_036944316.1 | mRNA | downstream | 462 | 28297202 ~ 28318817 (+) | False | si:dkeyp-77h1.4 |
XM_036944308.1 | mRNA | downstream | 731 | 28297471 ~ 28318817 (+) | False | si:dkeyp-77h1.4 |
XM_036944304.1 | mRNA | downstream | 6968 | 28303708 ~ 28318817 (+) | False | si:dkeyp-77h1.4 |
XM_036944321.1 | mRNA | downstream | 7419 | 28304159 ~ 28318817 (+) | True | si:dkeyp-77h1.4 |
XM_021556935.2 | mRNA | downstream | 34993 | 28331733 ~ 28334614 (+) | False | ino80e |
TU148132 | other | upstream | 191667 | 28088647 ~ 28089445 (+) | True | G128436 |
TU147867 | other | upstream | 563949 | 27716482 ~ 27717163 (+) | True | G128185 |
TU147350 | other | upstream | 977557 | 27302078 ~ 27303555 (+) | True | LOC110485466 |
TU147273 | other | upstream | 1090519 | 27189991 ~ 27190593 (+) | True | G127644 |
TU147247 | other | upstream | 1120467 | 27148176 ~ 27160645 (+) | True | LOC110485212 |
TU148570 | other | downstream | 635316 | 28932056 ~ 28944390 (+) | True | LOC110485990 |
TU148590 | other | downstream | 643159 | 28939899 ~ 28981288 (+) | True | G128853 |
TU148818 | other | downstream | 1180877 | 29477617 ~ 29478130 (+) | True | LOC110534631 |
TU148912 | other | downstream | 1187893 | 29484633 ~ 29485130 (+) | True | G129155 |
TU150186 | other | downstream | 1303286 | 29600026 ~ 29641096 (+) | True | G130308 |