Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU148818 |
| length | 514 |
| RNA type | TUCP |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC110534631 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 29424822 ~ 29478401 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007229 | integrin-mediated signaling pathway | biological_process |
| GO:0007155 | cell adhesion | biological_process |
| GO:0008305 | integrin complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU148911 | lncRNA | upstream | 1259 | 29476081 ~ 29476358 (+) | True | G129154 |
| TU148910 | lncRNA | upstream | 1627 | 29475772 ~ 29475990 (+) | True | G129153 |
| TU148908 | lncRNA | upstream | 3097 | 29474253 ~ 29474520 (+) | True | G129151 |
| TU148906 | lncRNA | upstream | 4127 | 29473282 ~ 29473490 (+) | True | G129149 |
| TU148855 | lncRNA | upstream | 110286 | 29366974 ~ 29367331 (+) | True | G129099 |
| TU148901 | lncRNA | downstream | 582 | 29478712 ~ 29480636 (+) | True | G129145 |
| TU148903 | lncRNA | downstream | 2836 | 29480966 ~ 29482856 (+) | True | G129146 |
| TU148913 | lncRNA | downstream | 7636 | 29485766 ~ 29486092 (+) | True | G129156 |
| TU148914 | lncRNA | downstream | 8142 | 29486272 ~ 29486741 (+) | True | G129157 |
| TU148917 | lncRNA | downstream | 10823 | 29488953 ~ 29489241 (+) | True | G129160 |
| XM_021557438.2 | mRNA | upstream | 59320 | 29369835 ~ 29418297 (+) | False | LOC110486083 |
| XM_036944567.1 | mRNA | upstream | 59320 | 29369835 ~ 29418297 (+) | True | LOC110486083 |
| XR_005034523.1 | mRNA | upstream | 244896 | 29231578 ~ 29232721 (+) | True | LOC118937130 |
| XM_036944551.1 | mRNA | upstream | 280977 | 29172098 ~ 29196640 (+) | False | LOC100136336 |
| XM_021557405.2 | mRNA | upstream | 280977 | 29172100 ~ 29196640 (+) | False | LOC100136336 |
| XM_021557640.2 | mRNA | downstream | 67114 | 29545244 ~ 29553946 (+) | False | LOC110486208 |
| XR_005039452.1 | mRNA | downstream | 116034 | 29594164 ~ 29594216 (+) | True | LOC118944146 |
| LOC118936731 | mRNA | downstream | 176745 | 29654875 ~ 29662028 (+) | True | LOC118936731 |
| XM_021557732.2 | mRNA | downstream | 201077 | 29679207 ~ 29685150 (+) | True | LOC110486269 |
| XM_021557752.2 | mRNA | downstream | 207725 | 29685855 ~ 29697686 (+) | False | LOC110486279 |
| TU148590 | other | upstream | 496329 | 28939899 ~ 28981288 (+) | True | G128853 |
| TU148570 | other | upstream | 533227 | 28932056 ~ 28944390 (+) | True | LOC110485990 |
| TU148197 | other | upstream | 929702 | 28250842 ~ 28547915 (+) | True | G128490 |
| TU148132 | other | upstream | 1388172 | 28088647 ~ 28089445 (+) | True | G128436 |
| TU147867 | other | upstream | 1760454 | 27716482 ~ 27717163 (+) | True | G128185 |
| TU148912 | other | downstream | 6503 | 29484633 ~ 29485130 (+) | True | G129155 |
| TU150186 | other | downstream | 121896 | 29600026 ~ 29641096 (+) | True | G130308 |
| TU150246 | other | downstream | 207837 | 29685967 ~ 29693851 (+) | True | LOC110486279 |
| TU150298 | other | downstream | 311446 | 29789576 ~ 29789831 (+) | True | G130414 |
| TU151478 | other | downstream | 1222052 | 30700182 ~ 30700623 (+) | True | G131491 |
