Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021619612.2 |
| length | 1317 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 6 |
| gene id | LOC110534679 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 30851297 ~ 30856046 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0016310 | phosphorylation | biological_process |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU151525 | lncRNA | upstream | 35964 | 30814506 ~ 30815333 (+) | True | G131527 |
| TU151493 | lncRNA | upstream | 89383 | 30747628 ~ 30761914 (+) | True | G131502 |
| TU151481 | lncRNA | upstream | 141576 | 30709496 ~ 30709721 (+) | True | G131494 |
| TU151480 | lncRNA | upstream | 141813 | 30708874 ~ 30709484 (+) | True | G131493 |
| TU151430 | lncRNA | upstream | 240377 | 30610691 ~ 30610920 (+) | True | G131448 |
| TU151538 | lncRNA | downstream | 4510 | 30860556 ~ 30861094 (+) | True | G131540 |
| TU151557 | lncRNA | downstream | 46758 | 30902804 ~ 30908231 (+) | True | G131556 |
| TU151751 | lncRNA | downstream | 200014 | 31056060 ~ 31056286 (+) | True | G131719 |
| TU151752 | lncRNA | downstream | 243154 | 31099200 ~ 31099445 (+) | True | G131720 |
| TU151753 | lncRNA | downstream | 244702 | 31100748 ~ 31100965 (+) | True | G131721 |
| XM_036945578.1 | mRNA | upstream | 6998 | 30821776 ~ 30844299 (+) | False | plekhf2 |
| XM_021558562.2 | mRNA | upstream | 6998 | 30821872 ~ 30844299 (+) | False | plekhf2 |
| XM_036945579.1 | mRNA | upstream | 6998 | 30822451 ~ 30844299 (+) | False | plekhf2 |
| XM_036945557.1 | mRNA | upstream | 6998 | 30824421 ~ 30844299 (+) | False | plekhf2 |
| XR_005036299.1 | mRNA | upstream | 6998 | 30824421 ~ 30844299 (+) | False | plekhf2 |
| XM_036945585.1 | mRNA | downstream | 17687 | 30873733 ~ 30891386 (+) | False | LOC110534689 |
| XM_036945587.1 | mRNA | downstream | 17687 | 30873733 ~ 30891386 (+) | True | LOC110534689 |
| XM_036945604.1 | mRNA | downstream | 280762 | 31136808 ~ 31146454 (+) | False | LOC110486784 |
| XM_036945598.1 | mRNA | downstream | 280764 | 31136810 ~ 31146454 (+) | True | LOC110486784 |
| XM_036933421.1 | mRNA | downstream | 343289 | 31199335 ~ 31202392 (+) | False | sri |
| TU151514 | other | upstream | 101343 | 30748055 ~ 30749954 (+) | True | G131517 |
| TU151478 | other | upstream | 150674 | 30700182 ~ 30700623 (+) | True | G131491 |
| TU150298 | other | upstream | 1061466 | 29789576 ~ 29789831 (+) | True | G130414 |
| TU150246 | other | upstream | 1157446 | 29685967 ~ 29693851 (+) | True | LOC110486279 |
| TU150186 | other | upstream | 1210201 | 29600026 ~ 29641096 (+) | True | G130308 |
| TU151868 | other | downstream | 435424 | 31291470 ~ 31293034 (+) | False | LOC110534710 |
| TU151908 | other | downstream | 504390 | 31360436 ~ 31363213 (+) | False | eaf1 |
| TU151909 | other | downstream | 504390 | 31360436 ~ 31366322 (+) | True | eaf1 |
| TU152486 | other | downstream | 1001602 | 31857648 ~ 31887572 (+) | False | G132342 |
| TU152482 | other | downstream | 1001640 | 31857686 ~ 31883073 (+) | True | G132342 |
