RNA id: trnas-aga-14


Basic Information

Item Value
RNA id trnas-aga-14
length 82
RNA type mRNA
GC content 0.52
exon number 1
gene id trnas-aga-14
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30993863 ~ 30993944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gttgtcgtggccgagtggttaaggcgatggactagaaatccattgggatcttcccgcgcaggttcgactcctgccgacaacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151740 lncRNA downstream 75424 30915338 ~ 30918439 (-) True G131712
TU151683 lncRNA downstream 178001 30814673 ~ 30815862 (-) False G131663
TU151680 lncRNA downstream 178001 30814763 ~ 30815862 (-) True G131663
TU151677 lncRNA downstream 183136 30810324 ~ 30810727 (-) True G131661
TU151635 lncRNA downstream 262562 30730724 ~ 30731301 (-) True G131630
TU151755 lncRNA upstream 107035 31100979 ~ 31101745 (-) True G131723
TU152094 lncRNA upstream 157647 31151591 ~ 31152623 (-) False G132020
TU152095 lncRNA upstream 157647 31151591 ~ 31175420 (-) False G132020
TU152093 lncRNA upstream 179012 31172956 ~ 31175420 (-) True G132020
TU152160 lncRNA upstream 201422 31195366 ~ 31195720 (-) True LOC110486852
trnas-aga-13 mRNA downstream 1972 30991810 ~ 30991891 (-) True trnas-aga-13
trnas-aga-12 mRNA downstream 4035 30989747 ~ 30989828 (-) True trnas-aga-12
trnas-aga-11 mRNA downstream 7763 30986019 ~ 30986100 (-) True trnas-aga-11
trnas-aga-10 mRNA downstream 9816 30983966 ~ 30984047 (-) True trnas-aga-10
trnas-aga-9 mRNA downstream 11580 30982202 ~ 30982283 (-) True trnas-aga-9
trnas-aga-15 mRNA upstream 1982 30995926 ~ 30996007 (-) True trnas-aga-15
trnas-aga-16 mRNA upstream 4053 30997997 ~ 30998078 (-) True trnas-aga-16
trnas-aga-17 mRNA upstream 6107 31000051 ~ 31000132 (-) True trnas-aga-17
trnas-aga-18 mRNA upstream 8162 31002106 ~ 31002187 (-) True trnas-aga-18
trnas-aga-19 mRNA upstream 10217 31004161 ~ 31004242 (-) True trnas-aga-19
TU151689 other downstream 94299 30897026 ~ 30899564 (-) True trnae-cuc
TU151687 other downstream 97880 30889693 ~ 30895983 (-) True c2h8orf37
TU150630 other downstream 1115295 29869046 ~ 29878568 (-) True LOC110486376
TU149442 other downstream 2516032 28477186 ~ 28477831 (-) True LOC110534614
TU149362 other downstream 2683131 28310319 ~ 28310732 (-) False G129582
TU152152 other upstream 198475 31192419 ~ 31195186 (-) False LOC110486852
TU152139 other upstream 198522 31192466 ~ 31195186 (-) False LOC110486852
TU152142 other upstream 198522 31192466 ~ 31196292 (-) False LOC110486852
TU152143 other upstream 198522 31192466 ~ 31195186 (-) False LOC110486852
TU152144 other upstream 198522 31192466 ~ 31195720 (-) False LOC110486852