RNA id: trnas-aga-35


Basic Information

Item Value
RNA id trnas-aga-35
length 82
RNA type mRNA
GC content 0.51
exon number 1
gene id trnas-aga-35
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31043247 ~ 31043328 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gttgtcgtggccgagtggttaaggcgatggactagaaatccattgggaTCTTTCCGCGCAGGTTCGACTCCTGCCGACAACG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151740 lncRNA downstream 124808 30915338 ~ 30918439 (-) True G131712
TU151683 lncRNA downstream 227385 30814673 ~ 30815862 (-) False G131663
TU151680 lncRNA downstream 227385 30814763 ~ 30815862 (-) True G131663
TU151677 lncRNA downstream 232520 30810324 ~ 30810727 (-) True G131661
TU151635 lncRNA downstream 311946 30730724 ~ 30731301 (-) True G131630
TU151755 lncRNA upstream 57651 31100979 ~ 31101745 (-) True G131723
TU152094 lncRNA upstream 108263 31151591 ~ 31152623 (-) False G132020
TU152095 lncRNA upstream 108263 31151591 ~ 31175420 (-) False G132020
TU152093 lncRNA upstream 129628 31172956 ~ 31175420 (-) True G132020
TU152160 lncRNA upstream 152038 31195366 ~ 31195720 (-) True LOC110486852
trnas-aga-34 mRNA downstream 1982 31041184 ~ 31041265 (-) True trnas-aga-34
trnas-aga-33 mRNA downstream 4045 31039121 ~ 31039202 (-) True trnas-aga-33
trnas-aga-32 mRNA downstream 9411 31033755 ~ 31033836 (-) True trnas-aga-32
trnas-aga-31 mRNA downstream 11474 31031692 ~ 31031773 (-) True trnas-aga-31
trnas-aga-30 mRNA downstream 13537 31029629 ~ 31029710 (-) True trnas-aga-30
trnas-aga-36 mRNA upstream 1982 31045310 ~ 31045391 (-) True trnas-aga-36
trnas-aga-37 mRNA upstream 4045 31047373 ~ 31047454 (-) True trnas-aga-37
trnas-aga-38 mRNA upstream 6108 31049436 ~ 31049517 (-) True trnas-aga-38
trnas-aga-39 mRNA upstream 8171 31051499 ~ 31051580 (-) True trnas-aga-39
trnas-aga-40 mRNA upstream 10227 31053555 ~ 31053636 (-) True trnas-aga-40
TU151689 other downstream 143683 30897026 ~ 30899564 (-) True trnae-cuc
TU151687 other downstream 147264 30889693 ~ 30895983 (-) True c2h8orf37
TU150630 other downstream 1164679 29869046 ~ 29878568 (-) True LOC110486376
TU149442 other downstream 2565416 28477186 ~ 28477831 (-) True LOC110534614
TU149362 other downstream 2732515 28310319 ~ 28310732 (-) False G129582
TU152152 other upstream 149091 31192419 ~ 31195186 (-) False LOC110486852
TU152139 other upstream 149138 31192466 ~ 31195186 (-) False LOC110486852
TU152142 other upstream 149138 31192466 ~ 31196292 (-) False LOC110486852
TU152143 other upstream 149138 31192466 ~ 31195186 (-) False LOC110486852
TU152144 other upstream 149138 31192466 ~ 31195720 (-) False LOC110486852