Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC110487089 |
| length | 1334 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | LOC110487089 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 31985359 ~ 31987549 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0030335 | positive regulation of cell migration | biological_process |
| GO:0033588 | elongator holoenzyme complex | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152594 | lncRNA | upstream | 3074 | 31981875 ~ 31982285 (+) | True | G132443 |
| TU152593 | lncRNA | upstream | 3742 | 31981369 ~ 31981617 (+) | True | G132442 |
| TU152592 | lncRNA | upstream | 5669 | 31979588 ~ 31979690 (+) | True | G132441 |
| TU152590 | lncRNA | upstream | 8183 | 31976960 ~ 31977176 (+) | True | G132439 |
| TU152568 | lncRNA | upstream | 45940 | 31939195 ~ 31939419 (+) | True | G132417 |
| TU152602 | lncRNA | downstream | 47005 | 32034554 ~ 32034921 (+) | True | G132451 |
| TU152619 | lncRNA | downstream | 81278 | 32068827 ~ 32070846 (+) | True | G132468 |
| TU152843 | lncRNA | downstream | 103219 | 32090768 ~ 32091153 (+) | True | G132669 |
| TU152845 | lncRNA | downstream | 104110 | 32091659 ~ 32091914 (+) | True | G132671 |
| TU153100 | lncRNA | downstream | 318982 | 32306531 ~ 32306857 (+) | True | G132912 |
| XM_036945742.1 | mRNA | upstream | 10758 | 31941966 ~ 31974601 (+) | False | LOC110487045 |
| XM_036945743.1 | mRNA | upstream | 10758 | 31942081 ~ 31974601 (+) | False | LOC110487045 |
| XM_036945744.1 | mRNA | upstream | 10758 | 31942082 ~ 31974601 (+) | False | LOC110487045 |
| XM_036945745.1 | mRNA | upstream | 10758 | 31942082 ~ 31974601 (+) | False | LOC110487045 |
| XM_036945746.1 | mRNA | upstream | 10758 | 31942082 ~ 31974601 (+) | False | LOC110487045 |
| XM_036945756.1 | mRNA | downstream | 135 | 31987684 ~ 32027099 (+) | False | LOC110534747 |
| XM_036945754.1 | mRNA | downstream | 8002 | 31995551 ~ 32027099 (+) | False | LOC110534747 |
| XM_036945755.1 | mRNA | downstream | 9469 | 31997018 ~ 32027099 (+) | True | LOC110534747 |
| XM_021558973.2 | mRNA | downstream | 68970 | 32056519 ~ 32063386 (+) | False | LOC110487062 |
| XM_021558992.2 | mRNA | downstream | 68972 | 32056521 ~ 32063386 (+) | False | LOC110487062 |
| TU152486 | other | upstream | 97787 | 31857648 ~ 31887572 (+) | False | G132342 |
| TU152482 | other | upstream | 102286 | 31857686 ~ 31883073 (+) | True | G132342 |
| TU151909 | other | upstream | 619037 | 31360436 ~ 31366322 (+) | True | eaf1 |
| TU151908 | other | upstream | 622146 | 31360436 ~ 31363213 (+) | False | eaf1 |
| TU151868 | other | upstream | 692325 | 31291470 ~ 31293034 (+) | False | LOC110534710 |
| TU153719 | other | downstream | 1179889 | 33167438 ~ 33169378 (+) | True | G133473 |
| TU153923 | other | downstream | 1508905 | 33496454 ~ 33497285 (+) | True | G133663 |
| TU154038 | other | downstream | 1826484 | 33814033 ~ 33814483 (+) | True | G133760 |
| TU155162 | other | downstream | 1974868 | 33962417 ~ 33962658 (+) | True | G134735 |
| TU156107 | other | downstream | 2700406 | 34687955 ~ 34690946 (+) | True | si:dkey-30e9.6 |
