RNA id: XM_021559550.2



Basic Information


Item Value
RNA id XM_021559550.2
length 1049
RNA type mRNA
GC content 0.52
exon number 2
gene id bola1
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 33254556 ~ 33256182 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TACAAGTCCCAGGCAGTCCAAAGCAGGCAGCACTTCCTGTGTACGTTGGAAAACTGAGGACACTGTGAAAAGGCTTTCTACAGTCGTCGACTTCCCCAAAATCCTCTGAATGCTGCCCAGTGTTCTCCGCTGTGCCAGTCCAATCTCCACCACCCTCGCCTTCACCAGGCCCTTAGCCCACTTCAGACCCCACATGGCTCCTGATCCCAACCGGCCCGTGGAGGGGGCCATACGGACCAAGCTCACCCAGCAGTTGGAGCCAGAACACCTGGAAGTCCACAATGAGAGCCACATGCACGCCGTGCCCCCTGGATCCGAGTCCCACTTCAGAGTCCTGGTGGTCAGCCCACGCTTCGACGGCCTCTCCCTGCTACAGCGCCACCGCCTTGTCAACGAGACCCTAGCCGAGGAGCTGAAGAGCTGTGTCCACGCGCTGGCCATCCAGGCCAAGACACCCCTGCAGTGGGGCAGCAACCCCAGCATAGCCAAGAGCCCACCCTGCATGGGAGGATCCAAGGGGGACCACACGGTGGAGGAGAAACTCAAGGCTGGACGGGACTGACCAGCAAAACTCAGCAGTCATCAACCCTGGTTCTAGAGAGTAACAGCCTGTGCGGGCTTTGGTTCCAGCACTAACTCATCTATTaaaatgtgttgtctgttcaaTACCTTGATAAGTTTAATCAggtctggaacaaaagcctgaacGCCCCATATGCCTGCAGTTGAAGAGGGTGTCAATTAACATTGTTGTAAACTAGTGTGATATCATTTCAATACTGCTTGAGAGATTGTTTCTAAATGAGCAACATCGCTTCGGTCTCTTGGCAGTTTAATTCAAGAAGAGTTTGGTTTTAGATTAGACTCCTGCATTTTAGTGGCCATCACTAAAATGAAGTGCACGAAGAAGTGAAGTGCACGAAGTCGAGACAGAATAAAGAATATGTTTTCTCAAGGTGCATTGGGGCAGTTTTGTGGTTAGcattatttcccccccccccccccaaagggctTGGGTGTCTGCtaataaaaatacatatttgatGACA

Function


GO: NA

KEGG:

id description
K22066 BOLA1; BolA-like protein 1

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU154729 lncRNA downstream 1134 33253213 ~ 33253422 (-) True G134369
TU154727 lncRNA downstream 4368 33249920 ~ 33250188 (-) True G134367
TU154724 lncRNA downstream 18367 33235965 ~ 33236189 (-) True G134364
TU154721 lncRNA downstream 23355 33230996 ~ 33231201 (-) True G134361
TU154639 lncRNA downstream 81063 33144403 ~ 33173493 (-) True LOC110487587
TU154739 lncRNA upstream 30557 33286739 ~ 33287261 (-) True G134379
TU154746 lncRNA upstream 36662 33292844 ~ 33293687 (-) True G134385
TU154791 lncRNA upstream 102980 33359162 ~ 33360751 (-) True LOC110487659
TU154818 lncRNA upstream 154435 33410617 ~ 33413968 (-) True LOC110487699
TU154833 lncRNA upstream 177522 33433704 ~ 33434538 (-) False G134456
XM_036946288.1 mRNA downstream 29431 33208500 ~ 33225125 (-) False LOC110487618
XM_036946284.1 mRNA downstream 29431 33210584 ~ 33225125 (-) False LOC110487618
XM_021559540.2 mRNA downstream 29432 33208500 ~ 33225124 (-) False LOC110487618
XM_021559524.2 mRNA downstream 81587 33164978 ~ 33172969 (-) True LOC110487594
XM_021559518.2 mRNA downstream 81590 33164978 ~ 33172966 (-) False LOC110487594
XM_036946299.1 mRNA upstream 292 33256474 ~ 33265949 (-) False sv2a
XM_036946294.1 mRNA upstream 292 33256474 ~ 33313903 (-) True sv2a
XM_036946314.1 mRNA upstream 70830 33327012 ~ 33357422 (-) False LOC110534759
XM_036946325.1 mRNA upstream 70830 33327012 ~ 33357457 (-) True LOC110534759
XM_036946341.1 mRNA upstream 102977 33359159 ~ 33391800 (-) False LOC110487659
TU154709 other downstream 29454 33212664 ~ 33225102 (-) True LOC110487618
TU154412 other downstream 466435 32748208 ~ 32788121 (-) True G134102
TU154326 other downstream 502978 32738829 ~ 32751578 (-) False LOC110514821
TU154330 other downstream 502978 32738829 ~ 32751578 (-) False LOC110514821
TU152378 other downstream 1605761 31635320 ~ 31648795 (-) True LOC110486999
TU155089 other upstream 609306 33865488 ~ 33865937 (-) True G134668
TU156114 other upstream 1348033 34604215 ~ 34604478 (-) True G135575
TU157060 other upstream 2050185 35306367 ~ 35307729 (-) True G136399
TU157405 other upstream 2418116 35674298 ~ 35675627 (-) False drd2l
TU157404 other upstream 2418249 35674431 ~ 35675705 (-) False drd2l

Expression Profile