RNA id: TU156513


Basic Information

Item Value
RNA id TU156513
length 337
lncRNA type sense_over
GC content 0.40
exon number 1
gene id ankmy2a
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 34953061 ~ 34960249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TGGTTTTTGTTCAAGAATAATGGAAAGGGCTTCAGGGAGTGTGATGTAAAGAAGTAGTAGTAGATTTAATTGCTATTCTATTTGTTCATGTCCTTATAAAACAAATACTTCTGTGTCTAGTCATTTCCCTAGTTAATAGATAAAGGACATTGTTTCCAAACATACAGGAAAGTGGCTTGAATTGGTCAAGAACAACATTATTTTGAAGTGACTATAACCTCCTGAAAAAGCAACTTGGCAAATCCCTCTAACAATGTTGCTGTTTTGTTGAATACTGATGTTTCAAAGATGTCAAATGTCTGATTGTAATACAACAGAATAAACACCGCAGTACTGT

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156564 lncRNA downstream 1000 34951846 ~ 34952080 (-) True G135980
TU156530 lncRNA downstream 47996 34904844 ~ 34905084 (-) True G135950
TU156420 lncRNA downstream 74865 34877738 ~ 34878215 (-) True G135850
TU156218 lncRNA downstream 217046 34735621 ~ 34736034 (-) True G135668
TU156047 lncRNA downstream 351629 34600883 ~ 34601451 (-) True G135522
TU156566 lncRNA upstream 20949 34974365 ~ 34974590 (-) True G135982
TU156567 lncRNA upstream 30108 34983524 ~ 34984165 (-) True G135983
TU156586 lncRNA upstream 63298 35016714 ~ 35017195 (-) True G136002
TU156915 lncRNA upstream 146749 35100165 ~ 35100983 (-) True G136280
TU156945 lncRNA upstream 154795 35108211 ~ 35112819 (-) True LOC110534832
XM_021560389.2 mRNA downstream 3569 34946899 ~ 34949511 (-) True LOC110488240
XM_021560368.2 mRNA downstream 6866 34913696 ~ 34946214 (-) False crppa
XM_021560376.2 mRNA downstream 6866 34913696 ~ 34946214 (-) True crppa
XM_036946779.1 mRNA downstream 57968 34881733 ~ 34895112 (-) True meox2a
XM_036946785.1 mRNA downstream 61515 34881733 ~ 34891565 (-) False meox2a
XM_021560437.2 mRNA upstream 13491 34966907 ~ 34980883 (-) False LOC110488264
XM_021560429.2 mRNA upstream 13491 34966907 ~ 34982023 (-) False LOC110488264
XM_036946803.1 mRNA upstream 13491 34966907 ~ 34982789 (-) False LOC110488264
XM_021560421.2 mRNA upstream 13491 34966907 ~ 34982793 (-) True LOC110488264
XM_021560477.2 mRNA upstream 83055 35036471 ~ 35086561 (-) False LOC110488299
TU156114 other downstream 348602 34604215 ~ 34604478 (-) True G135575
TU155089 other downstream 1087143 33865488 ~ 33865937 (-) True G134668
TU154709 other downstream 1727978 33212664 ~ 33225102 (-) True LOC110487618
TU154412 other downstream 2164959 32748208 ~ 32788121 (-) True G134102
TU154330 other downstream 2201502 32738829 ~ 32751578 (-) False LOC110514821
TU157060 other upstream 352951 35306367 ~ 35307729 (-) True G136399
TU157405 other upstream 720882 35674298 ~ 35675627 (-) False drd2l
TU157404 other upstream 721015 35674431 ~ 35675705 (-) False drd2l
TU158240 other upstream 1416588 36370004 ~ 36370328 (-) True G137479
TU158620 other upstream 1680777 36634193 ~ 36639005 (-) True G137839

Expression Profile