Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU156665 |
| length | 209 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC110533739 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 35122803 ~ 35127514 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006464 | cellular protein modification process | biological_process |
| GO:0008474 | palmitoyl-(protein) hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU156663 | lncRNA | upstream | 782 | 35122850 ~ 35123075 (+) | False | LOC110533739 |
| TU156649 | lncRNA | upstream | 21782 | 35101843 ~ 35102075 (+) | True | G136055 |
| TU156638 | lncRNA | upstream | 34525 | 35087279 ~ 35089332 (+) | True | G136044 |
| TU156606 | lncRNA | upstream | 74903 | 35042312 ~ 35048954 (+) | True | G136021 |
| TU156605 | lncRNA | upstream | 84934 | 35036470 ~ 35038923 (+) | True | G136020 |
| TU156677 | lncRNA | downstream | 19670 | 35143735 ~ 35145446 (+) | True | G136079 |
| TU156684 | lncRNA | downstream | 33767 | 35157832 ~ 35158037 (+) | True | G136086 |
| TU156696 | lncRNA | downstream | 75277 | 35199342 ~ 35200486 (+) | True | G136097 |
| TU156706 | lncRNA | downstream | 109129 | 35233194 ~ 35239050 (+) | False | LOC110534843 |
| TU156701 | lncRNA | downstream | 109722 | 35233787 ~ 35238941 (+) | False | LOC110534843 |
| NM_001124357.1 | mRNA | upstream | 98849 | 35023007 ~ 35025008 (+) | True | tnf-alpha |
| NM_001124425.1 | mRNA | upstream | 114151 | 35004580 ~ 35009706 (+) | True | lt-b2 |
| XR_002468381.2 | mRNA | upstream | 123872 | 34984948 ~ 34999985 (+) | False | LOC110488281 |
| XR_005036520.1 | mRNA | upstream | 123872 | 34984948 ~ 34999985 (+) | False | LOC110488281 |
| XR_005036519.1 | mRNA | upstream | 126638 | 34984948 ~ 34997219 (+) | False | LOC110488281 |
| XM_021560547.2 | mRNA | downstream | 3905 | 35127970 ~ 35141476 (+) | False | LOC110488331 |
| XM_021560537.2 | mRNA | downstream | 3949 | 35128014 ~ 35141476 (+) | False | LOC110488331 |
| XM_021560555.2 | mRNA | downstream | 4115 | 35128180 ~ 35141476 (+) | False | LOC110488331 |
| XM_021560571.2 | mRNA | downstream | 5149 | 35129214 ~ 35141476 (+) | True | LOC110488331 |
| XM_036946911.1 | mRNA | downstream | 26446 | 35150511 ~ 35151707 (+) | True | LOC110488356 |
| TU156467 | other | upstream | 123302 | 34998396 ~ 35000555 (+) | True | LOC110488281 |
| TU156464 | other | upstream | 127061 | 34984972 ~ 34996796 (+) | False | LOC110488281 |
| TU156498 | other | upstream | 151056 | 34972449 ~ 34972801 (+) | True | G135920 |
| TU156494 | other | upstream | 151926 | 34971640 ~ 34971931 (+) | True | G135916 |
| TU156107 | other | upstream | 432911 | 34687955 ~ 34690946 (+) | True | si:dkey-30e9.6 |
| TU156680 | other | downstream | 27695 | 35151760 ~ 35153650 (+) | True | lypc |
| TU156686 | other | downstream | 56614 | 35180679 ~ 35183996 (+) | False | LOC110488391 |
| TU156687 | other | downstream | 56614 | 35180679 ~ 35183996 (+) | True | LOC110488391 |
| TU157479 | other | downstream | 661626 | 35785691 ~ 35787470 (+) | True | LOC110488639 |
| TU157485 | other | downstream | 731084 | 35855149 ~ 35856400 (+) | False | LOC100653444 |
