RNA id: TU157405


Basic Information

Item Value
RNA id TU157405
length 1162
RNA type TUCP
GC content 0.38
exon number 2
gene id drd2l
representative False

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35674291 ~ 35700846 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CCCGCCGTGCCACCTTCGAGGACGGCGTGAGTGGCCGCGAGCGCTGGAGGGAGCGAAATGCAGACAGGGAGAAGGGAGCGATGGCGAAGGAGAGGGTGAAAGGGACTCTGTCGCAGCAGAAGGAGAGGAAGGCGACCCAGATGCTGGCTATCGTGCTAGGTGTGTTCATCATCTGCTGGCTACCCTTCTTCCTGACCCACGTGCTGAAGGCCCACTGTGCCAGCTGCTGTATCTCCCCCTCCCTGTACAGTGCTGTCACCTGGCTGGGCTACCTCAACAGTGCCGTCAACCCCGTCATCTACACCACCTTCAACATCGAGTTCCGTAAGGCCTTCATCAAGATCCTAAACTGCTGAGTacagggaagaagaggaggggggagagtgggaggaaggACAAGTGTGAAAAGTGTTTGAGTAGTGGagagaggcaaaaaaaaaaaaggtaatagACTAGAAATGAAATTAAAGAAGTGAAAGAGAGGGGTGAAAACAAAGACAAGAAGGGaatggaaggagagatagagggggatgtagagagaggtgacagagaagataaaaaaatatatataatttaagaGGTCAAACAGAAGAGCAAGTGAATCAAATttacagaaataccaaatcaaaAACAGTCTTGGGAATTATAAAGAGATGTACACTTCTGTAAATATAAAACATAACCGGGTGGAGAGAGATATTCTGAAGGGGTAGGGCACAAACAGTGGCAGAAGACTGTCCCACTACGTACGAGGATGACTAAGTAAATGTATTGCTCTCTGATTCCGCTCTCACATATAATGTCTGCAGACGTTGTCCTGTTTTTACTCTGATACAGTTATGTACAGTTTGTAAATGACGTTAATTAAATTACAGAGGTAATCTTTTAAGGAGATACACAATCAATCTGCACCATCAAGCGCAATTTTTCTCCAATAGCCGTCTTGTTGTGTCGTCCCAGTGTAAACAAGCCTATAagagatgtattatattaagaaCATGATGATGTTGGTGAAGATATGATGCCATGGTGATATGATGAGCGACTAATCAAGGTTTGTTCATAaagtatatgtatatattgtttaGAGTTTGTTCATGTGAGCTCTGCTGTAAATATCTGTATTACTGTTATTGTACAGATACATGTAATAAATTATATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157387 lncRNA downstream 56801 35617243 ~ 35617497 (-) True G136680
TU157380 lncRNA downstream 66813 35606590 ~ 35607485 (-) True G136676
TU157376 lncRNA downstream 67738 35605701 ~ 35606560 (-) True G136675
TU157375 lncRNA downstream 68001 35605701 ~ 35606297 (-) False G136675
TU157371 lncRNA downstream 75270 35598666 ~ 35599028 (-) True G136671
TU157406 lncRNA upstream 12668 35688295 ~ 35700787 (-) True drd2l
TU157453 lncRNA upstream 75734 35751361 ~ 35751639 (-) True G136743
TU157454 lncRNA upstream 76133 35751760 ~ 35752076 (-) True G136744
TU157459 lncRNA upstream 78647 35754274 ~ 35754488 (-) True G136749
TU157461 lncRNA upstream 80184 35755811 ~ 35756183 (-) True G136751
XM_036947146.1 mRNA downstream 5887 35664248 ~ 35668411 (-) True LOC110488606
XM_021560872.2 mRNA downstream 10636 35629549 ~ 35663662 (-) True LOC110488593
XM_021560863.2 mRNA downstream 11634 35629549 ~ 35662664 (-) False LOC110488593
XM_021619801.2 mRNA downstream 63501 35609629 ~ 35610797 (-) True LOC110534863
XM_036947128.1 mRNA downstream 64869 35607541 ~ 35609429 (-) True LOC118939553
XM_021560895.2 mRNA upstream 27255 35702882 ~ 35726314 (-) True LOC110488613
XM_036933832.1 mRNA upstream 60704 35736331 ~ 35738872 (-) True LOC118936742
XM_036947201.1 mRNA upstream 115635 35791262 ~ 35799257 (-) False LOC110488647
XM_036947200.1 mRNA upstream 115635 35791262 ~ 35799534 (-) True LOC110488647
XM_036947203.1 mRNA upstream 136121 35811748 ~ 35817824 (-) False vsig10l
TU157060 other downstream 366569 35306367 ~ 35307729 (-) True G136399
TU156114 other downstream 1069820 34604215 ~ 34604478 (-) True G135575
TU155089 other downstream 1808361 33865488 ~ 33865937 (-) True G134668
TU154709 other downstream 2449196 33212664 ~ 33225102 (-) True LOC110487618
TU154412 other downstream 2886177 32748208 ~ 32788121 (-) True G134102
TU158240 other upstream 694377 36370004 ~ 36370328 (-) True G137479
TU158620 other upstream 958566 36634193 ~ 36639005 (-) True G137839
TU158866 other upstream 1150239 36825866 ~ 36828397 (-) False G138080
TU158919 other upstream 1169306 36844933 ~ 36849345 (-) True pnrc2
TU159561 other upstream 1785247 37460874 ~ 37463758 (-) True LOC110501508

Expression Profile