Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU161302 |
| length | 868 |
| lncRNA type | read_through |
| GC content | 0.36 |
| exon number | 2 |
| gene id | LOC110489269 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38861507 ~ 38973957 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161300 | lncRNA | upstream | 9445 | 38850907 ~ 38852062 (+) | True | G140318 |
| TU161308 | lncRNA | upstream | 13821 | 38847345 ~ 38847686 (+) | True | LOC110489178 |
| TU161248 | lncRNA | upstream | 154199 | 38707079 ~ 38707308 (+) | True | G140271 |
| TU161241 | lncRNA | upstream | 161762 | 38699431 ~ 38699745 (+) | True | G140264 |
| TU161190 | lncRNA | upstream | 201295 | 38659946 ~ 38660212 (+) | True | G140214 |
| TU161310 | lncRNA | downstream | 255 | 38974072 ~ 38974620 (+) | True | G140325 |
| TU161396 | lncRNA | downstream | 19186 | 38993003 ~ 38993230 (+) | True | G140409 |
| TU161600 | lncRNA | downstream | 33031 | 39006848 ~ 39007112 (+) | True | G140595 |
| TU161603 | lncRNA | downstream | 41056 | 39014873 ~ 39015078 (+) | True | G140598 |
| TU161606 | lncRNA | downstream | 44394 | 39018211 ~ 39018430 (+) | True | G140601 |
| XR_005036648.1 | mRNA | upstream | 2979 | 38857221 ~ 38858528 (+) | True | LOC118939688 |
| XM_036947870.1 | mRNA | upstream | 4281 | 38855182 ~ 38857226 (+) | True | LOC110533769 |
| XM_021561795.2 | mRNA | upstream | 13812 | 38823585 ~ 38847695 (+) | False | LOC110489178 |
| XM_036947868.1 | mRNA | upstream | 38066 | 38789536 ~ 38823441 (+) | False | LOC110489163 |
| XM_021561959.2 | mRNA | downstream | 13252 | 38987069 ~ 38990470 (+) | True | LOC110489273 |
| XM_021561973.2 | mRNA | downstream | 26904 | 39000721 ~ 39044657 (+) | False | LOC110489280 |
| XM_036990520.1 | mRNA | downstream | 196456 | 39170273 ~ 39195284 (+) | False | atp1a3 |
| XM_036933222.1 | mRNA | downstream | 196462 | 39170279 ~ 39195284 (+) | False | atp1a3 |
| NM_001124630.1 | mRNA | downstream | 196700 | 39170517 ~ 39195241 (+) | True | atp1a3 |
| TU160072 | other | upstream | 809763 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 917495 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 920793 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 939437 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 2565478 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 2994557 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 2994557 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 3536513 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 4757055 | 43730872 ~ 43731218 (+) | True | G146054 |
