Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036948460.1 |
| length | 1158 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 11 |
| gene id | LOC110489815 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 41294681 ~ 41355200 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| GO:0072546 | endoplasmic reticulum membrane protein complex | cellular_component |
| id | description |
|---|---|
| K23563 | EMC2, TTC35; ER membrane protein complex subunit 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU164289 | lncRNA | upstream | 152818 | 41143302 ~ 41143572 (+) | True | G143068 |
| TU164287 | lncRNA | upstream | 157622 | 41134363 ~ 41138768 (+) | True | G143066 |
| TU164266 | lncRNA | upstream | 180858 | 41115263 ~ 41115532 (+) | True | G143045 |
| TU164076 | lncRNA | upstream | 184307 | 41111706 ~ 41112083 (+) | True | G142864 |
| TU164075 | lncRNA | upstream | 186031 | 41110135 ~ 41110359 (+) | True | G142863 |
| TU164464 | lncRNA | downstream | 21246 | 41376316 ~ 41376687 (+) | True | G143225 |
| TU164474 | lncRNA | downstream | 37360 | 41392430 ~ 41392645 (+) | True | G143235 |
| TU164475 | lncRNA | downstream | 39783 | 41394853 ~ 41395107 (+) | True | G143236 |
| TU164476 | lncRNA | downstream | 42230 | 41397300 ~ 41397637 (+) | True | G143237 |
| TU164993 | lncRNA | downstream | 314722 | 41669792 ~ 41670307 (+) | True | G143739 |
| XM_021562694.2 | mRNA | upstream | 411250 | 40881174 ~ 40885140 (+) | True | LOC110489783 |
| XM_036948320.1 | mRNA | upstream | 448631 | 40781026 ~ 40847759 (+) | False | LOC110489695 |
| XM_036948326.1 | mRNA | upstream | 448631 | 40783361 ~ 40847759 (+) | False | LOC110489695 |
| XM_021562456.2 | mRNA | upstream | 643008 | 40636099 ~ 40653382 (+) | True | LOC110489685 |
| XM_021562443.2 | mRNA | upstream | 977127 | 40309178 ~ 40319263 (+) | True | galr1a |
| XM_021562771.2 | mRNA | downstream | 99189 | 41454259 ~ 41460908 (+) | True | LOC110489825 |
| XM_021562780.2 | mRNA | downstream | 184170 | 41539240 ~ 41541654 (+) | False | LOC110489834 |
| XM_021562800.2 | mRNA | downstream | 339367 | 41694437 ~ 41710790 (+) | False | LOC110489853 |
| XM_036948527.1 | mRNA | downstream | 344189 | 41699259 ~ 41710790 (+) | True | LOC110489853 |
| XM_021562824.2 | mRNA | downstream | 375615 | 41730685 ~ 41741910 (+) | True | LOC110489869 |
| TU160072 | other | upstream | 3244646 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 3352378 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 3355676 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 3374320 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 184225 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 613304 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 613304 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 1155260 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 2375802 | 43730872 ~ 43731218 (+) | True | G146054 |
