RNA id: NM_001124697.1



Basic Information


Item Value
RNA id NM_001124697.1
length 1142
RNA type mRNA
GC content 0.52
exon number 4
gene id igf2b
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 47368180 ~ 47373699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTCTATAGCCCTCACCAACTGGGAAACTAACTCAACTGCAACCTCTCCAACCAAATAACGCTCAACGTTAGATTACTGCCAATTGACATGGAAACCCAGAAAAGACACGAATACCACTCAGTTTGCCACACCTGCCGGAGAACGGAAAACACAAGAATGAAGGTCAAGATGATGTCTTCGTCAAATCGAGTACTGGTCATTGCGCTGGCACTTACTCTGTACATCGTTGAAGTGGCTTCGGCAGAAACGCTATGTGGAGGAGAACTGGTGGACGCGCTGCAGTTCGTCTGTGAAGATAGAGGATTCTATTTCAgTAGGCCAACCAGCAGGTCTAACAGCAGACGCTCCCAGAACCGTGGTATCGTGGAGGAGTGTTGTTTCCGTAGCTGTGACCTCAACCTGTTGGAGCAGTACTGTGCCAAACCTGCCAAGTCAGAGAGGGACGTGTCGGCCACCTCTCTACAGATCATTCCCATGGTGCCCACAATCAAACAGGATGTCCCAAGAAAACATGTGACTGTGAAGTATTCCAAATATGAGGCGTGGCAGAGGAAGGCTGCTCAGCGGCTCCGGAGGGGCGTCCCGGCCATCCTCAGGGCCCGGAAGTTCCGGAGGCAGGCGGTGAAGATCAAGGCCCAAGAGCAGGCGATGTTCCACCGGCCTCTGATCACCCTGCCCAGCAAGCTTCCCCCAGTCCTGCCCCCCACGGACAACTACGTCAGCCACAATTGAGCCTCCTCACCAGCACCCCAACTCCCCCATCAAAAGCCCTTTGCACAGACAACGAGTTTGGAGGgagatgaagaagaaaaaaagactaGGGGATTATAGCTTTGTCTCTGACGTCATTTCTGTGGCAAGTCCTCGTTTGACCTTTCCCCCCACCCAGCCCACCCCCAAATCCCGTCCGAGCCCACCGACCAACCAACCCCCCCCACCCACTCCCCTGCCCATCTACTACTTTTTGACCCCAAACCTACCCTAGACCCCCTCACCCAGACACTCAAACATACGTTCACATTCTTCCTGTCCTGACTCTCactcttgcgctctctctttcATTCACCGACACAAAAGACACCAACACAATCAATGAACAAAAAGTGAACTATTTGGCTGAATGCAATTTAGGTGGATcctta

Function


GO:

id name namespace
GO:0005615 extracellular space cellular_component
GO:0005179 hormone activity molecular_function
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K13769 IGF2; insulin-like growth factor 2

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU172508 lncRNA upstream 2063 47365665 ~ 47366117 (+) True G150576
TU172498 lncRNA upstream 18145 47349821 ~ 47350035 (+) True G150566
TU172496 lncRNA upstream 20635 47347270 ~ 47347545 (+) True G150564
TU172418 lncRNA upstream 121225 47246646 ~ 47246955 (+) True G150488
TU172408 lncRNA upstream 138071 47227385 ~ 47230109 (+) True G150478
TU172489 lncRNA downstream 1789 47375488 ~ 47377174 (+) True G150557
TU172838 lncRNA downstream 19564 47393263 ~ 47393541 (+) True G150890
TU172904 lncRNA downstream 60258 47433957 ~ 47434670 (+) True G150956
TU173172 lncRNA downstream 269771 47643470 ~ 47643678 (+) True G151214
TU173184 lncRNA downstream 277748 47651447 ~ 47654336 (+) True G151226
XM_036933601.1 mRNA upstream 162739 47134215 ~ 47205441 (+) False cpt1ab
XM_036933595.1 mRNA upstream 162739 47134845 ~ 47205441 (+) False cpt1ab
XM_036933608.1 mRNA upstream 162739 47134845 ~ 47205441 (+) False cpt1ab
NM_001246330.1 mRNA upstream 164629 47160932 ~ 47203551 (+) True cpt1ab
XM_036949756.1 mRNA upstream 360508 46981686 ~ 47007672 (+) False uevld
XM_036949781.1 mRNA downstream 653710 48027409 ~ 48133974 (+) False osbpl5
XM_036949784.1 mRNA downstream 653763 48027462 ~ 48133974 (+) False osbpl5
XM_036949787.1 mRNA downstream 653763 48027462 ~ 48133974 (+) False osbpl5
XM_036949788.1 mRNA downstream 653763 48027462 ~ 48133974 (+) False osbpl5
XM_036949798.1 mRNA downstream 653765 48027464 ~ 48133974 (+) False osbpl5
TU172245 other upstream 382954 46981719 ~ 46985226 (+) True uevld
TU169948 other upstream 1875801 45472745 ~ 45492379 (+) True G148191
TU169947 other upstream 1895551 45472082 ~ 45472629 (+) False G148191
TU169210 other upstream 2496680 44870800 ~ 44871500 (+) True G147510
TU168471 other upstream 2938787 44429153 ~ 44429393 (+) True G146841
TU172952 other downstream 124249 47497948 ~ 47547579 (+) True G150997
TU174225 other downstream 1183083 48556782 ~ 48557686 (+) True G152167
TU176287 other downstream 2724717 50098416 ~ 50100474 (+) True LOC110491026
TU177155 other downstream 3791716 51165415 ~ 51167174 (+) True G154859
TU177860 other downstream 3948097 51321796 ~ 51322433 (+) True LOC110501653

Expression Profile