Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU176531 |
| length | 471 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 1 |
| gene id | LOC118937274 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 50129515 ~ 50131269 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176530 | lncRNA | downstream | 662 | 50129621 ~ 50130137 (-) | False | LOC118937274 |
| TU176529 | lncRNA | downstream | 2848 | 50127723 ~ 50127951 (-) | True | G154313 |
| TU176526 | lncRNA | downstream | 11211 | 50119320 ~ 50119588 (-) | True | G154310 |
| TU176523 | lncRNA | downstream | 14548 | 50116049 ~ 50116251 (-) | True | G154307 |
| TU176472 | lncRNA | downstream | 37494 | 50091176 ~ 50093305 (-) | True | G154271 |
| TU176532 | lncRNA | upstream | 246 | 50131515 ~ 50131798 (-) | True | G154316 |
| TU176583 | lncRNA | upstream | 47534 | 50178803 ~ 50196982 (-) | True | G154355 |
| TU176670 | lncRNA | upstream | 170555 | 50301824 ~ 50304149 (-) | True | G154430 |
| TU177298 | lncRNA | upstream | 262107 | 50393376 ~ 50446304 (-) | True | G154989 |
| TU177322 | lncRNA | upstream | 295843 | 50427112 ~ 50465114 (-) | True | G155008 |
| XM_021564378.2 | mRNA | downstream | 3396 | 50124561 ~ 50127403 (-) | True | plscr3a |
| XM_021564372.2 | mRNA | downstream | 92907 | 49962896 ~ 50037892 (-) | False | LOC110490984 |
| XM_021564373.2 | mRNA | downstream | 92907 | 49962896 ~ 50037892 (-) | True | LOC110490984 |
| XM_021564371.2 | mRNA | downstream | 293752 | 49802029 ~ 49837047 (-) | False | LOC110490968 |
| XM_036949960.1 | mRNA | downstream | 293758 | 49802029 ~ 49837041 (-) | False | LOC110490968 |
| XM_021564431.2 | mRNA | upstream | 140949 | 50272218 ~ 50287180 (-) | False | LOC110491057 |
| XM_036950023.1 | mRNA | upstream | 140949 | 50272218 ~ 50287727 (-) | True | LOC110491057 |
| XM_036950101.1 | mRNA | upstream | 343363 | 50474632 ~ 50535936 (-) | False | LOC110491068 |
| XM_036950090.1 | mRNA | upstream | 343363 | 50474632 ~ 50535937 (-) | False | LOC110491068 |
| XM_036950111.1 | mRNA | upstream | 343363 | 50474632 ~ 50536434 (-) | False | LOC110491068 |
| TU176510 | other | downstream | 23352 | 50101430 ~ 50107447 (-) | False | G154300 |
| TU176505 | other | downstream | 24062 | 50101553 ~ 50106737 (-) | True | G154300 |
| TU174069 | other | downstream | 1827136 | 48303311 ~ 48303663 (-) | True | G152024 |
| TU173950 | other | downstream | 1903855 | 48226299 ~ 48226944 (-) | True | G151920 |
| TU173905 | other | downstream | 1942521 | 48187958 ~ 48188278 (-) | True | G151875 |
| TU176559 | other | upstream | 25417 | 50156686 ~ 50157825 (-) | True | G154338 |
| TU177312 | other | upstream | 284474 | 50415743 ~ 50452147 (-) | True | G155003 |
| TU177396 | other | upstream | 448529 | 50579798 ~ 50581349 (-) | True | G155072 |
| TU177629 | other | upstream | 839807 | 50971076 ~ 50971935 (-) | True | G155281 |
| TU177680 | other | upstream | 908601 | 51039870 ~ 51049880 (-) | False | LOC110491241 |
