Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002468779.2 |
| length | 1324 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | LOC110491108 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 50678814 ~ 50689147 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0015074 | DNA integration | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176846 | lncRNA | upstream | 78663 | 50599718 ~ 50600151 (+) | True | G154591 |
| TU176847 | lncRNA | upstream | 90091 | 50588429 ~ 50588723 (+) | True | G154592 |
| TU176849 | lncRNA | upstream | 91225 | 50587274 ~ 50587589 (+) | True | G154594 |
| TU176848 | lncRNA | upstream | 92625 | 50585533 ~ 50586189 (+) | True | G154593 |
| TU176839 | lncRNA | upstream | 110059 | 50568324 ~ 50568755 (+) | True | G154584 |
| TU176919 | lncRNA | downstream | 43758 | 50732905 ~ 50733216 (+) | True | G154662 |
| TU176920 | lncRNA | downstream | 44342 | 50733489 ~ 50783570 (+) | True | G154663 |
| TU176921 | lncRNA | downstream | 44476 | 50733623 ~ 50735681 (+) | True | G154664 |
| TU176926 | lncRNA | downstream | 67824 | 50756971 ~ 50778278 (+) | True | G154669 |
| TU176937 | lncRNA | downstream | 97210 | 50786357 ~ 50786953 (+) | True | G154679 |
| XM_021564453.2 | mRNA | upstream | 98598 | 50575416 ~ 50580216 (+) | True | zgc:56585 |
| XM_021564446.2 | mRNA | upstream | 99151 | 50575416 ~ 50579663 (+) | False | zgc:56585 |
| XM_036950046.1 | mRNA | upstream | 208689 | 50460347 ~ 50470125 (+) | False | LOC110515922 |
| XM_036950048.1 | mRNA | upstream | 208689 | 50460929 ~ 50470125 (+) | True | LOC110515922 |
| XM_036950031.1 | mRNA | upstream | 245258 | 50424133 ~ 50433556 (+) | False | LOC110510939 |
| XM_036950140.1 | mRNA | downstream | 28433 | 50717580 ~ 50884089 (+) | False | LOC110491126 |
| XM_036950156.1 | mRNA | downstream | 28434 | 50717581 ~ 50884089 (+) | False | LOC110491126 |
| XM_036950131.1 | mRNA | downstream | 28435 | 50717582 ~ 50884089 (+) | False | LOC110491126 |
| XM_036950145.1 | mRNA | downstream | 28436 | 50717583 ~ 50884089 (+) | False | LOC110491126 |
| XM_036950148.1 | mRNA | downstream | 130861 | 50820008 ~ 50884089 (+) | False | LOC110491126 |
| TU176287 | other | upstream | 578340 | 50098416 ~ 50100474 (+) | True | LOC110491026 |
| TU174225 | other | upstream | 2121128 | 48556782 ~ 48557686 (+) | True | G152167 |
| TU172952 | other | upstream | 3131235 | 47497948 ~ 47547579 (+) | True | G150997 |
| TU172245 | other | upstream | 3693588 | 46981719 ~ 46985226 (+) | True | uevld |
| TU169948 | other | upstream | 5186435 | 45472745 ~ 45492379 (+) | True | G148191 |
| TU177155 | other | downstream | 476268 | 51165415 ~ 51167174 (+) | True | G154859 |
| TU177860 | other | downstream | 632649 | 51321796 ~ 51322433 (+) | True | LOC110501653 |
| TU177846 | other | downstream | 723119 | 51412266 ~ 51417118 (+) | True | rl28 |
| TU177903 | other | downstream | 731700 | 51420847 ~ 51421122 (+) | True | G155541 |
| TU178397 | other | downstream | 1127363 | 51816510 ~ 51824182 (+) | False | G156000 |
