Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021566614.2 |
| length | 1290 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 10 |
| gene id | LOC110492362 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 57289492 ~ 57302882 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K02725 | PSMA1; 20S proteasome subunit alpha 6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU185782 | lncRNA | upstream | 11477 | 57277803 ~ 57278015 (+) | True | G162922 |
| TU185076 | lncRNA | upstream | 124656 | 57074503 ~ 57164836 (+) | True | G162270 |
| TU185111 | lncRNA | upstream | 164048 | 57125145 ~ 57125444 (+) | True | G162299 |
| TU185072 | lncRNA | upstream | 218478 | 57069356 ~ 57071014 (+) | True | G162267 |
| TU185068 | lncRNA | upstream | 222265 | 57066827 ~ 57067227 (+) | True | G162264 |
| TU185802 | lncRNA | downstream | 7702 | 57310584 ~ 57310831 (+) | True | G162939 |
| TU185807 | lncRNA | downstream | 15588 | 57318470 ~ 57318680 (+) | True | G162944 |
| TU185818 | lncRNA | downstream | 43356 | 57346238 ~ 57346489 (+) | True | G162955 |
| TU185912 | lncRNA | downstream | 228068 | 57530950 ~ 57531175 (+) | True | G163047 |
| TU185913 | lncRNA | downstream | 229067 | 57531949 ~ 57532168 (+) | True | G163048 |
| XM_036951218.1 | mRNA | upstream | 261714 | 56870028 ~ 57027778 (+) | False | LOC110492317 |
| XM_036951247.1 | mRNA | upstream | 261714 | 56870028 ~ 57027778 (+) | False | LOC110492317 |
| XM_036951228.1 | mRNA | upstream | 264569 | 56869081 ~ 57024923 (+) | False | LOC110492317 |
| XM_036951237.1 | mRNA | upstream | 264569 | 56870398 ~ 57024923 (+) | False | LOC110492317 |
| XM_021566361.2 | mRNA | upstream | 454306 | 56725446 ~ 56835186 (+) | False | LOC110492194 |
| XM_021566755.2 | mRNA | downstream | 23446 | 57326328 ~ 57329184 (+) | True | rpl27a |
| XR_005039481.1 | mRNA | downstream | 24507 | 57327389 ~ 57327520 (+) | True | LOC118944169 |
| XR_005039480.1 | mRNA | downstream | 25438 | 57328320 ~ 57328450 (+) | True | LOC118944168 |
| XM_021566728.2 | mRNA | downstream | 27514 | 57330396 ~ 57331987 (+) | False | akip1 |
| XM_021566742.2 | mRNA | downstream | 27517 | 57330399 ~ 57331987 (+) | False | akip1 |
| TU184934 | other | upstream | 235850 | 57048314 ~ 57053642 (+) | True | G162130 |
| TU184425 | other | upstream | 1036894 | 56245044 ~ 56252598 (+) | True | G161687 |
| TU183214 | other | upstream | 1342247 | 55946143 ~ 55947245 (+) | True | G160569 |
| TU182462 | other | upstream | 2560632 | 54728296 ~ 54728860 (+) | True | G159889 |
| TU181970 | other | upstream | 2936104 | 54352983 ~ 54353388 (+) | True | G159415 |
| TU186506 | other | downstream | 625268 | 57928150 ~ 57931991 (+) | True | G163513 |
| TU186698 | other | downstream | 912795 | 58215677 ~ 58216383 (+) | True | G163660 |
| TU189317 | other | downstream | 2642826 | 59945708 ~ 59953165 (+) | True | G166131 |
| TU190136 | other | downstream | 3212750 | 60515632 ~ 60515880 (+) | True | G166878 |
| TU190389 | other | downstream | 3548550 | 60851432 ~ 60866455 (+) | False | LOC110493059 |
