Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00027776 |
| length | 1413 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | XLOC_013900 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 10485847 ~ 10500555 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007200 | phospholipase C-activating G protein-coupled receptor signaling pathway | biological_process |
| GO:0007204 | positive regulation of cytosolic calcium ion concentration | biological_process |
| GO:0006954 | inflammatory response | biological_process |
| GO:0002430 | complement receptor mediated signaling pathway | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004875 | complement receptor activity | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-141212-252 | Predicted to enable G protein-coupled receptor activity and complement receptor activity. Predicted to be involved in several processes, including complement receptor mediated signaling pathway; phospholipase C-activating G protein-coupled receptor signaling pathway; and positive regulation of cytosolic calcium ion concentration. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. |
| ensembl_id | ENSDART00000135719 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00029876 | lncRNA | upstream | 619125 | 9838182 ~ 9866722 (+) | True | XLOC_013895 |
| TCONS_00027766 | lncRNA | upstream | 728831 | 9751075 ~ 9757016 (+) | True | XLOC_013893 |
| TCONS_00027762 | lncRNA | upstream | 902318 | 9533277 ~ 9583529 (+) | False | XLOC_013891 |
| TCONS_00029875 | lncRNA | upstream | 1058431 | 9381657 ~ 9427416 (+) | False | XLOC_013887 |
| TCONS_00027787 | lncRNA | downstream | 69375 | 10565683 ~ 10574989 (+) | True | XLOC_013905 |
| TCONS_00027795 | lncRNA | downstream | 177522 | 10673830 ~ 10674606 (+) | True | XLOC_013910 |
| TCONS_00027811 | lncRNA | downstream | 517314 | 11013622 ~ 11014858 (+) | True | XLOC_013918 |
| TCONS_00029877 | lncRNA | downstream | 1799142 | 12295450 ~ 12300891 (+) | True | XLOC_013928 |
| TCONS_00027828 | lncRNA | downstream | 1921206 | 12417514 ~ 12420573 (+) | True | XLOC_013930 |
| TCONS_00027775 | mRNA | upstream | 9823 | 10473612 ~ 10476024 (+) | True | XLOC_013899 |
| TCONS_00027773 | mRNA | upstream | 77818 | 10396042 ~ 10408029 (+) | False | XLOC_013898 |
| TCONS_00027774 | mRNA | upstream | 80824 | 10396159 ~ 10405023 (+) | True | XLOC_013898 |
| TCONS_00027772 | mRNA | upstream | 133268 | 10341738 ~ 10352579 (+) | True | XLOC_013897 |
| TCONS_00027770 | mRNA | upstream | 135874 | 10339538 ~ 10349973 (+) | False | XLOC_013897 |
| TCONS_00027779 | mRNA | downstream | 12015 | 10508323 ~ 10509424 (+) | True | XLOC_013901 |
| TCONS_00027780 | mRNA | downstream | 22140 | 10518448 ~ 10519544 (+) | False | XLOC_013902 |
| TCONS_00027781 | mRNA | downstream | 22173 | 10518481 ~ 10519589 (+) | True | XLOC_013902 |
| TCONS_00027782 | mRNA | downstream | 30920 | 10527228 ~ 10528344 (+) | True | XLOC_013903 |
| TCONS_00027783 | mRNA | downstream | 39785 | 10536093 ~ 10537982 (+) | True | XLOC_013904 |
| TCONS_00027758 | other | upstream | 1041969 | 9443772 ~ 9443878 (+) | True | XLOC_013889 |
| TCONS_00027757 | other | upstream | 1055903 | 9429857 ~ 9429944 (+) | True | XLOC_013888 |
| TCONS_00027739 | other | upstream | 1316622 | 9150094 ~ 9169225 (+) | False | XLOC_013879 |
| TCONS_00027731 | other | upstream | 1389487 | 9091871 ~ 9096360 (+) | False | XLOC_013877 |
| TCONS_00027715 | other | upstream | 2186737 | 8298994 ~ 8299110 (+) | True | XLOC_013865 |
| TCONS_00027788 | other | downstream | 71063 | 10567371 ~ 10567486 (+) | True | XLOC_013906 |
| TCONS_00027800 | other | downstream | 335784 | 10832092 ~ 10835621 (+) | False | XLOC_013912 |
| TCONS_00027817 | other | downstream | 782105 | 11278413 ~ 11278529 (+) | True | XLOC_013922 |
| TCONS_00027836 | other | downstream | 2448542 | 12944850 ~ 12944966 (+) | True | XLOC_013935 |
| TCONS_00027847 | other | downstream | 3337571 | 13833879 ~ 13833993 (+) | True | XLOC_013944 |
