Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021567378.2 |
| length | 864 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 7 |
| gene id | LOC110492964 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 60697379 ~ 60712198 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0030239 | myofibril assembly | biological_process |
| GO:0005861 | troponin complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU190323 | lncRNA | upstream | 27666 | 60669512 ~ 60669713 (+) | True | G167059 |
| TU190285 | lncRNA | upstream | 79327 | 60617769 ~ 60618052 (+) | True | G167025 |
| TU190250 | lncRNA | upstream | 91517 | 60605591 ~ 60605862 (+) | True | G166991 |
| TU190166 | lncRNA | upstream | 147822 | 60549349 ~ 60549557 (+) | True | G166907 |
| TU190159 | lncRNA | upstream | 158901 | 60537821 ~ 60538478 (+) | True | G166900 |
| TU190416 | lncRNA | downstream | 88249 | 60800447 ~ 60829029 (+) | True | G167137 |
| TU190434 | lncRNA | downstream | 129463 | 60841661 ~ 60891125 (+) | True | G167154 |
| TU190444 | lncRNA | downstream | 144394 | 60856592 ~ 60907513 (+) | True | G167164 |
| TU190479 | lncRNA | downstream | 208918 | 60921116 ~ 60921322 (+) | True | G167198 |
| TU190485 | lncRNA | downstream | 224055 | 60936253 ~ 60936489 (+) | True | G167204 |
| XM_021567375.2 | mRNA | upstream | 1493 | 60682980 ~ 60695886 (+) | False | LOC110492922 |
| XM_021567376.2 | mRNA | upstream | 1493 | 60683018 ~ 60695886 (+) | True | LOC110492922 |
| XM_021567377.2 | mRNA | upstream | 30778 | 60654601 ~ 60666601 (+) | True | LOC110492948 |
| XM_036934029.1 | mRNA | upstream | 57863 | 60627938 ~ 60639516 (+) | True | syt8 |
| XM_021567324.2 | mRNA | upstream | 290559 | 60398876 ~ 60406820 (+) | True | LOC110492846 |
| XR_005037406.1 | mRNA | downstream | 2455 | 60714653 ~ 60719958 (+) | True | LOC118941118 |
| XM_021617522.2 | mRNA | downstream | 13392 | 60725590 ~ 60734031 (+) | False | LOC100170211 |
| NM_001129990.1 | mRNA | downstream | 13420 | 60725618 ~ 60733866 (+) | True | LOC100170211 |
| XM_021567380.2 | mRNA | downstream | 22927 | 60735125 ~ 60740362 (+) | True | LOC110492990 |
| XM_036952224.1 | mRNA | downstream | 69517 | 60781715 ~ 60846975 (+) | False | LOC110493043 |
| TU190136 | other | upstream | 181499 | 60515632 ~ 60515880 (+) | True | G166878 |
| TU189317 | other | upstream | 744214 | 59945708 ~ 59953165 (+) | True | G166131 |
| TU186698 | other | upstream | 2480996 | 58215677 ~ 58216383 (+) | True | G163660 |
| TU186506 | other | upstream | 2765388 | 57928150 ~ 57931991 (+) | True | G163513 |
| TU184934 | other | upstream | 3643737 | 57048314 ~ 57053642 (+) | True | G162130 |
| TU190389 | other | downstream | 139234 | 60851432 ~ 60866455 (+) | False | LOC110493059 |
| TU190393 | other | downstream | 139234 | 60851432 ~ 60866455 (+) | True | LOC110493059 |
| TU190578 | other | downstream | 350395 | 61062593 ~ 61074591 (+) | True | G167288 |
| TU190618 | other | downstream | 519998 | 61232196 ~ 61232545 (+) | True | G167325 |
| TU190863 | other | downstream | 819391 | 61531589 ~ 61532327 (+) | True | LOC110510683 |
