Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU190978 |
| length | 238 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 3 |
| gene id | LOC118937286 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 61902987 ~ 61905185 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU190938 | lncRNA | upstream | 68342 | 61756215 ~ 61834645 (+) | True | G167616 |
| TU190944 | lncRNA | upstream | 108117 | 61794580 ~ 61794870 (+) | True | G167622 |
| TU190921 | lncRNA | upstream | 173098 | 61674301 ~ 61729889 (+) | True | G167599 |
| TU190911 | lncRNA | upstream | 203615 | 61639655 ~ 61699372 (+) | True | LOC118941131 |
| TU190851 | lncRNA | upstream | 377904 | 61520483 ~ 61525083 (+) | True | LOC110501762 |
| TU191648 | lncRNA | downstream | 33306 | 61937048 ~ 61937284 (+) | True | G168279 |
| TU191649 | lncRNA | downstream | 33744 | 61937486 ~ 61937775 (+) | True | G168280 |
| TU191660 | lncRNA | downstream | 41367 | 61945109 ~ 61945418 (+) | True | G168291 |
| TU191662 | lncRNA | downstream | 42462 | 61946204 ~ 61946444 (+) | True | G168293 |
| TU191705 | lncRNA | downstream | 87769 | 61991511 ~ 62038823 (+) | True | G168335 |
| XM_036934069.1 | mRNA | upstream | 22330 | 61870393 ~ 61880657 (+) | False | LOC118936783 |
| XM_036952517.1 | mRNA | upstream | 32629 | 61862246 ~ 61870358 (+) | True | LOC118941134 |
| XM_021564510.2 | mRNA | upstream | 52229 | 61845396 ~ 61850758 (+) | True | LOC110491157 |
| XR_005037429.1 | mRNA | upstream | 143858 | 61758241 ~ 61759129 (+) | True | LOC110512213 |
| XR_005037428.1 | mRNA | upstream | 192882 | 61708449 ~ 61710105 (+) | True | LOC110491115 |
| XM_036952522.1 | mRNA | downstream | 7201 | 61910943 ~ 61916119 (+) | True | LOC110491137 |
| XM_021567628.2 | mRNA | downstream | 154187 | 62057929 ~ 62062744 (+) | True | avpr1aa |
| XM_036952547.1 | mRNA | downstream | 188677 | 62092419 ~ 62154496 (+) | True | ppm1h |
| XM_036952617.1 | mRNA | downstream | 379462 | 62283204 ~ 62345950 (+) | False | fbln1 |
| XM_036952598.1 | mRNA | downstream | 379470 | 62283212 ~ 62369308 (+) | False | fbln1 |
| TU190972 | other | upstream | 22563 | 61879770 ~ 61880424 (+) | True | LOC118936783 |
| TU190931 | other | upstream | 175533 | 61726959 ~ 61727454 (+) | True | G167609 |
| TU190863 | other | upstream | 370660 | 61531589 ~ 61532327 (+) | True | LOC110510683 |
| TU190618 | other | upstream | 670442 | 61232196 ~ 61232545 (+) | True | G167325 |
| TU190578 | other | upstream | 828396 | 61062593 ~ 61074591 (+) | True | G167288 |
| TU192528 | other | downstream | 881616 | 62785358 ~ 62785643 (+) | True | G169130 |
| TU193588 | other | downstream | 1916719 | 63820461 ~ 63830320 (+) | True | G170131 |
| TU193612 | other | downstream | 1969506 | 63873248 ~ 63878233 (+) | True | G170150 |
| TU196081 | other | downstream | 3627404 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU196056 | other | downstream | 3689775 | 65593517 ~ 65640976 (+) | False | jph3 |
