RNA id: XM_021567684.2


Basic Information

Item Value
RNA id XM_021567684.2
length 6358
RNA type mRNA
GC content 0.43
exon number 4
gene id wnt7bb
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 62471244 ~ 62508410 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GCTGTATGTTACTGTAGCTGTACAACAACTGCACGTGTTCAGCTCAACCCAGAAGCCCGTCCCAATCCTTGCATATCCATACCAGCTCAAAGGAGGAGGCGTGGATAGGGCTTTTGTTACCTGCATTAGAATACCTGCAGCTACATGGAAAGAATTTAAGATGTCGTCAAAGGAGAGGAACTGCAACCGATGTGTTACGGCCTCAATACAGACGAGGGGAGGAAAAGGAGAACATTGCACCGGGTGTAAATGTACCTGGCGCACGCAAGAACAAGTGAGAATACATAACTTGTCCTACTTTGATACAAAGGACGAAATATAAGAATGGTTCACTCGAGAACTCATCTTACTCCTCGACCCATCGCTCTCTCATAAGTGTTTTGTTGTCGAACTCTTTAACAACCACGTTTTGGATCACCATCACTCTCCGTCTCACCTGTTACCCGTTGACTATGGATTTTAAACGGATAAAGATTTCAAAGGAGTTTAGATTTGACATTTTGGAAAAGATAAGTTATATCTGCATCTGGAAAGGTTAGGATACTGTAGTGTTGCCAATGTGAACGCAAGAATGACCACTTCATTCTAGTGAATGGCCCGTCCCAGAAGCGGTTATGATCATGCACAGACCCCTCCGAAGGTGGAATTTGTGCTTCTTGTGCTTTGGCATCATCTACTTAAGGCTTGGGGCCCTGTCTTCCGTGGTGGCGTTGGGTGCCAACATCATCTGCAACAAGATCCCTGGGCTGGCCCCTCGCCAACGGGccatctgccagagccgcccggaCGCCATCATCGTGGTGGGGGAGGGCGCTCAGCTGGGCATCAATGAGTGTCAGTACCAGTTTCGCTACGGCCGGTGGAATTGCTCCGCCCTGGGGGAGAGGACTGTCTTCGGACAGGAGCTGCGAGTAGGTAGCCGGGAGGCTGCATTCACGTACGCTATCACGGCCGCCGGCGTAGCCCACGCCATCACGGCGGCGTGTAGCCAGGGCAACCTGAGCCAGTGTGGCTGCGACCGGGAGAAGCAGGGTTACTATAATCAGGAGGAGGGCTGGAAGTGGGGAGGCTGCTCGGCGGACATCAAGTACGGCGTGGAGTTCTCCAGGAGGTTCGTAGACGCCCGCGAGATCAAGAAGACCACGCGCCGGCTGATGAACCTCCACAACAATGAGGCAGGGAGAAAGGTCCTGGAAGAGCGGATGAAGTTGGAGTGTAAGTGTCACGGCGTGTCGGGCTCCTGCACTACCAAGACCTGCTGGACGACCCTGCCCAAGTTCAGAGAGATCGGCTATATCCTGAAGGACAAGTACAACGAGGCGGTTCATGTGGAAGTGGTCCGGGCCAGCCGACTACGCCAACCCACCTTCCTCAAGGTGAAGAAGACCCAGGGCTTCCGCAAGCCCATGGAGACCGACCTCGTCTACATTGAGAGGTCGCCCAACTACTGCGAGGAGGACGCGGCCACGGGGAGCGTGGGTACCCAGGGGAGGCTGTGTAACCGCACCTCGCCCCACACGGACGGCTGCGACCTCATGTGCTGCGGCCGGGGCTACAACACGCACCAGTACACCAAAGTGTGGCAGTGCAACTGTAAGTTCCAGTGGTGCTGCTTTGTCAAGTGCAACACGTGCAGCGAGAGGACGGAGGTGTTTACCTGCAAATAAAGGGGTTTGTCATAACGGACCTACAGTACGGTACTATGACGGGGAGGGGCGTAGCAGGACTAGTTGGATGAGGAGGAAGACCCCCAGAGGAAAGATAAATGGACATGTCTTGGAACAGGAACAATGAAAGACTTTACAATAAAAAAGGAATGGAATTTTTCATGTCAGCTCTTCATGGCATCGTTTTGCACAGCAGAATCAAAATTTGCTTTTTAAGAAAGTAAAGGCTAAATATCAATAGGTAATAATACTACCCCAAATCTTAGACCGACTGAGACAAAATAATGTGTGCTCATGTAGTGATGTATTCAAAGTGACTCTAAAAGTTGGGACTACAGGAAACAAATAGTGCCTGGACGGGAACTGTGCATTGCACTCTgggatttgtagttctttatttCCCGGAATGGCTTCTAAATGGACCAGAAAGGGACTGGAGATGTGGTAGAAATTGACAGTAACTGTTGAGGGATGAGACTCTGGGAAAGAGTCATCTAAAAGTCTTCTAGTAAGAACTCTTTGGagttttcttttgtttttccacagagggagagagcagaggtgAATATTTTAGCCCCCAAACAGGAGGTGTTTTCTTTTTGGAGTTGTGTAGACATGAAGAACGCTGTTTTAGCGTGGTGCCTTGGGGCGCACCGAAAGCTGAGTCTCTATAGTAAGCCCTCTGCTGCCAACTGGAACAGAGTATGTCCGTTTTCCAGTCACACTGGAACTGTCTGTTTGAACACTGAAAATAAATGGTTTATTTATGTTATAGTATCTTAAAACAAAGCACTAACGGGTAGAAATGTCTTTTTTGTACTAAGtgtaaaaaatacttttttttagaaAACTCTGACTGAAGATTATGCGTGTCTTTTAGAAAATGGTACCCATCCCACTATCAATCCCCCTTTTTTCTAAAATGGTTCCATTGCTATTGGTGTGttgactacaacaacaacaaaaatcaacaTTAAAGTGTATTTTGCAAGTAGAATCAATCACGTCGGTTCTATTCTGCTGTAGCATAGCTTTTGTTTGCAGTCATTTATGAACCAGATGGTAGGCCTACATCCTGCCTGGCTTATGTTGCATTTTCAAGCAAAGACAGTAGAAAGAGCACTCCTTTCTTAACCACAAAGACCCTTGCTCAATTAATTTAACGTGATATTGACATGTTGCCGCATGTGTTGTCGAGATATGCCTCAAATGGAAATCATATGAACTCCAATTTGACAGAGTTTTTGAAATGTattgcaaagaaaaaaacaagacTGAGAATCAAAGTGAGTGAAGTCTGCTGGTCTCGAGGGGAAATGCAAGGCGTCAGCCAATGGCTTCATTCATTCACTGCATACAGAGCTGTGATCTCATTCTCATCTGTATTCATTGGTTGCGGTTATGCTATACAAAAGTGTCCGGTTACATCAGGTTTCAGTGACGTAGAACATCAGAACACATCATTTTGGCACTTTATCATAATCGATCATACAGCTCCTCCTCTATTTTTCTGTGTGTTTAAGCTTCATATGTTGATACGAGACCATTTGTTTTTCTGCTGATTTGAGACCATGACGACGCAAGGTTTACTTCTCAGACAGGTCAGTTTCTTTCCTGTTTAATTTTCTTGGTTTTTCATGAGATAGACAGATCTGTCATTGTGTGCACAGTGAATAATAAACGTTGCAATTTAGGTCAAAGGTGCTGTTTTATTGTAGTGACGATGTAAATTTAGTGTTGGTGCTACTCAAATACAATAGTAGTTTAATTAGCCGGATAGTCTGCTGACTAAAGCAAACTATTTAATGTCGCCTAGACGTGAAAGTTTATCAAATGAGTATGTGTTCTAATATTGATTAAAACCACTGTTACTAATTTCAGGATACAGTATAAACGCACAAACAAGGGGATAAACGTGTGAAAATGATCCGATTTATCTCTCAGATAGTTTGTCATCGCTGCACCCACATATTAGAACGACTAATCCTGGAGTTACTGATTAACATAACTGGAGTCAATTGTTCACTTTGCCATATTTAAATTCTCTACAATATCCAGAGTTATCTCAAACTTTTATGGCAGAAGACCGTGTATTGTTTGGGCCAAGTGCAAGTTGATTCACATAATATTGCGTGTCAGTGCTCATCTCAGTTGCCCATGACAACCAAAGGGCTTGTTATTTGGGCTCTGACTCCTTGCAATGGAACACATTTTAATATGCCTGGCCCTTGTATGTAGAGATTTTAAGCCGCCATTGTCTATATAAAAAATGTCCCTTATTCAGAAGTTCCAACCACCGTGAATATGGCTATTGGCGTTGCCGAAGGAAGCGTAAATCATTAAATATCATAAATAAATCAACCAGCTTGCTGACTTTGACATTATTTTGTACACAGCACATGTTCATAATAATCTGTGGTTCGTCTGTCTTGATTATGGTGCGCACAAAACAAAAGTCAATTATCTCTCGCGGCCCATcgctgagtcagtcagtcacatgTGTGCAGCGAGTGGGAGAGCAAGTGGAAGAGAGAGTCTTTGGGGTTTCTAAAGCTTCATAGGGAGTTATTGTGTTGCCTTTTCTGGGTAATTGGGGTTGTCTGTCTTGGATTGTCAGAGCAGCCCGTAAAGCCACATCTTCTCACTCTATCATTGAATAATCGGTCTAACCCAGTCACCATTTGTTGCACATGTTCTTGACTGTATGCCTGCTGTAGTCAATATATCACAATTTGATATGAGATACtattaaatcaaaatcaaataaaatgttattggtcacatacacatatttagcagatgttattgcgggtgtagcgaaatgcctaGAATTGATAGTGTTAGGGTAGCTACTCTAAAAATGTAGTTTACCAatctaccaattacttcacactggaagaagttaagctaccCTTAAAGAAAcatagtttacttaactaaagttactttgaaaaagtagttcacgaCATCCAAACGACTAAATCTGGGAAGTGTCATAGAATACAAATTGCAAGAACGGTTCTCTCTGCCGTCAGATGTTAACAGTGTAATTTAAACTATTAAACACTAACTGTATGTTTCACGGGAGAATTAGTCAGATCTGATgccgaaaaagaaaggaaatggTTGCCTACTTCACACGTATTTGATTTCATTTTTGCAACAGAAAAAAGTCGTGTGTAGGAGTTCCAGTAGGTAGCATGGCAAAAGAAAGTAGTGTGTAGGAGTTCCAGTAGGTAGCGTGGCAAAAGAAAGTAGTGTGTAGGAGTTCCAGTAGGTAGCGTGGCAAAAGAAAGTAGTGTGTAGGAGTTCCAGTAGGTAGCGTGGCAAAAGAAAGAAGTGTGTAGGAGTTCCAGTAGGTAGCATGGCAAAAGAAAGAAGTGTGTAGGAGTTCCAGTAGGTAGCGTGGCAAAAGAAAGTAGTGTGTAGGAGTTCCAGTAGGTAGCGTGGCAAAAGAAAGTAGTGTGTAGGAGTTCCAGTAGGTAGCATGGCAAAAGAAAGTAGTGTGTAGGAGTTCCAGTAGGTAGCGTGGCAAAAAAAAGTAATGAACTGCTGAAAACACTATCTAGATTTAGATGAACTACCAcaaagctactgcaaaatgtaggttattactagttgaactacatgtaaCTCACTATTACCCAACACTGATTATTGATATCAATAATTACATTTCAAGTGTTATGGATGCCTTTACATGTTGATGGAGTACCTGTACAGTGATTACCTCAACTCTCTGAACCCTCACCATACTCTCTGTGTTGGCAGCATTGGCCCCTAGAGTCACTAAAAACTTACTATAGGCCATttaagcagacacttttatcaaaAGCTActttacagtcatgcgtgcagaCATATGGGTGCCCTggaaatcgaacccacaaccctggcggtGCAAGCGCCACTCTCTACCAagtgagccacacaggaccacaaaTGGGAAATTGGAGCTCCATGCAAATGACCTGTGCTGAATAAGAAGTGCCTCATTTTCCCTCTTGCTTTTTGGACACAAACGAGTGTCATTCTTTTGTGAGTGTGTTTTTCTAGATGGATGGAACAAGGAAGTGCATGTGCAGTCGGAAACAGCAAGTGAGATAGAGTGTGGGGATACTGTTAAGGAAGTACAACATTGGGTCAAGGGTAGCAGCTCTGTGGAGGAGAGAAATTGGTGTGAATCATATTTGTGTTGTCTTTTCATAAACTGAAATTCTTGTGTCCTCTAATAGTTAATAGTCAAATCCACTTAAGATCAGATCAAAAAGTAAGATAAAAACTAATAGCGCACTCGTCTTTGAACCAATTCATTTGTTGGTACTTGTTAGTTCCCTTGTTGGTACTTGTTAGTTCCCTTGTTGGTTGTTGATGGTTAATTTGAATGTTGAAAGGATTCTAATATGGACTCTGAAAGTCAGTCACCCAGACTTGGGTTTGTCTACTTAGCCCAGCTTGAAATTAGCATTTGAGGAACTGAAAATGGTTATGTCATTTTCTAAATATCCATTTACAGATTGATGGAGTAATTTGGATGAATGTTGCATTTAAAATTGAGAACTTGATATAACAAATGAGTTATCAAATCAAACAGTTTTTGTCACATgcattgtaaacaacaggtgtagactaacagtgcaATGCTGACTtaggggcccttcccaacaacgcagagagaaataatagaaaaa

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0005102 signaling receptor binding molecular_function

KEGG:

id description
K00572 WNT7; wingless-type MMTV integration site family, member 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU192156 lncRNA downstream 215683 62223185 ~ 62255561 (-) True G168766
TU192148 lncRNA downstream 224093 62209056 ~ 62247151 (-) True G168758
TU191658 lncRNA downstream 526848 61944059 ~ 61944396 (-) True G168289
TU191656 lncRNA downstream 527268 61943657 ~ 61943976 (-) True G168287
TU191655 lncRNA downstream 528576 61942450 ~ 61942668 (-) True G168286
TU192755 lncRNA upstream 94363 62602773 ~ 62602987 (-) True G169349
TU192756 lncRNA upstream 95013 62603423 ~ 62603975 (-) True G169350
TU192757 lncRNA upstream 96256 62604666 ~ 62605407 (-) True G169351
TU192752 lncRNA upstream 102954 62611364 ~ 62612531 (-) True G169346
TU192751 lncRNA upstream 104703 62613113 ~ 62614612 (-) True G169345
XM_021567656.2 mRNA downstream 199122 62268804 ~ 62272122 (-) True LOC110493394
XM_036952561.1 mRNA downstream 212977 62223933 ~ 62258267 (-) True slc6a13
XM_036952533.1 mRNA downstream 253612 62167418 ~ 62217632 (-) False mon2
XM_021567748.2 mRNA upstream 240594 62749004 ~ 62878134 (-) True LOC110493460
XM_021579553.2 mRNA upstream 446709 62955119 ~ 62998770 (-) False LOC110501769
XM_036952668.1 mRNA upstream 514558 63022968 ~ 63025781 (-) True LOC118941153
XM_021567779.2 mRNA upstream 527979 63036389 ~ 63040509 (-) False LOC110493479
XR_005037466.1 mRNA upstream 542935 63051345 ~ 63053275 (-) False LOC110501771
TU191507 other downstream 955588 61515237 ~ 61515656 (-) True G168141
TU191442 other downstream 979573 61490434 ~ 61491671 (-) True G168078
TU191382 other downstream 1171152 61291139 ~ 61300092 (-) True LOC110493186
TU191365 other downstream 1215229 61254512 ~ 61256015 (-) True G168021
TU191197 other downstream 1496223 60974762 ~ 60975021 (-) True G167866
TU193660 other upstream 638364 63146774 ~ 63150851 (-) True LOC110493507
TU194598 other upstream 1451113 63959523 ~ 63963821 (-) True LOC110501772
TU194766 other upstream 1657553 64165963 ~ 64168398 (-) True tmem117
TU195797 other upstream 2577162 65085572 ~ 65086188 (-) True G172141
TU196875 other upstream 2875027 65383437 ~ 65383873 (-) True G173121

Expression Profile