Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU192429 |
| length | 671 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | LOC118941151 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 62520532 ~ 62530986 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU192387 | lncRNA | upstream | 37606 | 62482740 ~ 62482954 (+) | True | G168992 |
| TU192386 | lncRNA | upstream | 38180 | 62482127 ~ 62482380 (+) | True | G168991 |
| TU192381 | lncRNA | upstream | 44151 | 62474140 ~ 62476409 (+) | True | G168986 |
| TU192380 | lncRNA | upstream | 49180 | 62469929 ~ 62471380 (+) | True | G168985 |
| TU191923 | lncRNA | upstream | 204588 | 62315751 ~ 62315972 (+) | True | G168539 |
| TU192407 | lncRNA | downstream | 38706 | 62568908 ~ 62589395 (+) | False | LOC110493430 |
| TU192413 | lncRNA | downstream | 81162 | 62611364 ~ 62612530 (+) | True | G169015 |
| TU192410 | lncRNA | downstream | 86901 | 62617103 ~ 62617350 (+) | False | LOC110493430 |
| TU192405 | lncRNA | downstream | 87336 | 62617538 ~ 62618766 (+) | True | LOC110493430 |
| TU192411 | lncRNA | downstream | 91030 | 62621232 ~ 62621911 (+) | True | G169013 |
| XM_036952598.1 | mRNA | upstream | 151252 | 62283212 ~ 62369308 (+) | False | fbln1 |
| XM_036952590.1 | mRNA | upstream | 151252 | 62283214 ~ 62369308 (+) | False | fbln1 |
| XM_036952607.1 | mRNA | upstream | 151256 | 62318250 ~ 62369304 (+) | True | fbln1 |
| XM_036952617.1 | mRNA | upstream | 174610 | 62283204 ~ 62345950 (+) | False | fbln1 |
| XM_036952547.1 | mRNA | upstream | 366064 | 62092419 ~ 62154496 (+) | True | ppm1h |
| XR_005037456.1 | mRNA | downstream | 31981 | 62562183 ~ 62618837 (+) | False | LOC110493430 |
| XR_005037458.1 | mRNA | downstream | 37152 | 62567354 ~ 62618837 (+) | False | LOC110493430 |
| XR_005037455.1 | mRNA | downstream | 38008 | 62568210 ~ 62618837 (+) | False | LOC110493430 |
| XR_005037453.1 | mRNA | downstream | 38009 | 62568211 ~ 62618837 (+) | False | LOC110493430 |
| XR_005037457.1 | mRNA | downstream | 38521 | 62568723 ~ 62589425 (+) | False | LOC110493430 |
| TU190972 | other | upstream | 640136 | 61879770 ~ 61880424 (+) | True | LOC118936783 |
| TU190931 | other | upstream | 793106 | 61726959 ~ 61727454 (+) | True | G167609 |
| TU190863 | other | upstream | 988233 | 61531589 ~ 61532327 (+) | True | LOC110510683 |
| TU190618 | other | upstream | 1288015 | 61232196 ~ 61232545 (+) | True | G167325 |
| TU190578 | other | upstream | 1445969 | 61062593 ~ 61074591 (+) | True | G167288 |
| TU192528 | other | downstream | 255156 | 62785358 ~ 62785643 (+) | True | G169130 |
| TU193588 | other | downstream | 1290259 | 63820461 ~ 63830320 (+) | True | G170131 |
| TU193612 | other | downstream | 1343046 | 63873248 ~ 63878233 (+) | True | G170150 |
| TU196081 | other | downstream | 3000944 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU196056 | other | downstream | 3063315 | 65593517 ~ 65640976 (+) | False | jph3 |
