Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU193561 |
| length | 1157 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC118941167 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 63761681 ~ 63763204 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU193424 | lncRNA | upstream | 51549 | 63708288 ~ 63710132 (+) | True | plxnb2b |
| TU193488 | lncRNA | upstream | 169419 | 63590849 ~ 63592262 (+) | True | G170035 |
| TU193207 | lncRNA | upstream | 470383 | 63196281 ~ 63291298 (+) | True | G169765 |
| TU193205 | lncRNA | upstream | 481261 | 63279826 ~ 63280420 (+) | True | G169764 |
| TU193152 | lncRNA | upstream | 605892 | 63152147 ~ 63155789 (+) | True | G169712 |
| TU193429 | lncRNA | downstream | 3782 | 63766983 ~ 63786331 (+) | False | LOC110493594 |
| TU193430 | lncRNA | downstream | 3782 | 63766983 ~ 63787919 (+) | True | LOC110493594 |
| TU194206 | lncRNA | downstream | 232921 | 63996122 ~ 63996775 (+) | True | G170697 |
| TU194262 | lncRNA | downstream | 303288 | 64066489 ~ 64144121 (+) | True | G170751 |
| TU194286 | lncRNA | downstream | 338886 | 64102087 ~ 64104111 (+) | True | G170774 |
| XM_036952828.1 | mRNA | upstream | 19757 | 63713054 ~ 63741924 (+) | False | tubgcp6 |
| XM_036952830.1 | mRNA | upstream | 19757 | 63713054 ~ 63741924 (+) | False | tubgcp6 |
| XM_036952833.1 | mRNA | upstream | 19757 | 63713054 ~ 63741924 (+) | True | tubgcp6 |
| XM_036952823.1 | mRNA | upstream | 51552 | 63525782 ~ 63710129 (+) | False | plxnb2b |
| XM_021567905.2 | mRNA | upstream | 486504 | 63262778 ~ 63275177 (+) | False | parvg |
| XM_021567959.2 | mRNA | downstream | 3687 | 63766888 ~ 63787922 (+) | False | LOC110493594 |
| XM_021567981.2 | mRNA | downstream | 152724 | 63915925 ~ 63942569 (+) | True | mov10l1 |
| XM_021618342.2 | mRNA | downstream | 187740 | 63950941 ~ 63952742 (+) | True | LOC110533812 |
| XM_021567998.2 | mRNA | downstream | 226226 | 63989427 ~ 64092188 (+) | False | nell2a |
| XM_036952885.1 | mRNA | downstream | 226226 | 63989427 ~ 64092188 (+) | True | nell2a |
| TU192528 | other | upstream | 976038 | 62785358 ~ 62785643 (+) | True | G169130 |
| TU190972 | other | upstream | 1881257 | 61879770 ~ 61880424 (+) | True | LOC118936783 |
| TU190931 | other | upstream | 2034227 | 61726959 ~ 61727454 (+) | True | G167609 |
| TU190863 | other | upstream | 2229354 | 61531589 ~ 61532327 (+) | True | LOC110510683 |
| TU190618 | other | upstream | 2529136 | 61232196 ~ 61232545 (+) | True | G167325 |
| TU193588 | other | downstream | 57260 | 63820461 ~ 63830320 (+) | True | G170131 |
| TU193612 | other | downstream | 110047 | 63873248 ~ 63878233 (+) | True | G170150 |
| TU196081 | other | downstream | 1767945 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU196056 | other | downstream | 1830316 | 65593517 ~ 65640976 (+) | False | jph3 |
| TU196057 | other | downstream | 1830316 | 65593517 ~ 65640976 (+) | True | jph3 |
