Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU196352 |
| length | 433 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | LOC110494008 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 65975745 ~ 66031253 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU196370 | lncRNA | upstream | 27937 | 65965873 ~ 65970958 (+) | True | G172658 |
| TU196342 | lncRNA | upstream | 69216 | 65929364 ~ 65929679 (+) | True | G172637 |
| TU196335 | lncRNA | upstream | 79677 | 65918913 ~ 65919218 (+) | True | G172630 |
| TU196296 | lncRNA | upstream | 128627 | 65869329 ~ 65870268 (+) | True | G172592 |
| TU196284 | lncRNA | upstream | 149729 | 65848953 ~ 65849166 (+) | True | G172586 |
| TU196314 | lncRNA | downstream | 360433 | 66359997 ~ 66363470 (+) | True | LOC110494202 |
| TU197656 | lncRNA | downstream | 530551 | 66530115 ~ 66530338 (+) | True | G173804 |
| TU197657 | lncRNA | downstream | 530888 | 66530452 ~ 66530710 (+) | True | G173805 |
| TU197658 | lncRNA | downstream | 532102 | 66531666 ~ 66531887 (+) | True | G173806 |
| TU197660 | lncRNA | downstream | 533894 | 66533458 ~ 66533659 (+) | True | G173808 |
| XM_036953388.1 | mRNA | upstream | 40145 | 65943159 ~ 65958750 (+) | True | LOC110494001 |
| XM_021568646.2 | mRNA | upstream | 81529 | 65884793 ~ 65917366 (+) | True | LOC110493994 |
| XM_036953346.1 | mRNA | upstream | 133190 | 65852513 ~ 65865705 (+) | True | LOC110493986 |
| XM_036953350.1 | mRNA | upstream | 133333 | 65852513 ~ 65865562 (+) | False | LOC110493986 |
| XM_021568702.2 | mRNA | downstream | 73727 | 66073291 ~ 66083738 (+) | False | ldhd |
| XM_021568708.2 | mRNA | downstream | 73729 | 66073293 ~ 66083957 (+) | False | ldhd |
| XM_021568693.2 | mRNA | downstream | 73730 | 66073294 ~ 66084029 (+) | True | ldhd |
| XM_021568733.2 | mRNA | downstream | 120362 | 66119926 ~ 66135667 (+) | True | gins3 |
| XM_036953459.1 | mRNA | downstream | 146026 | 66145590 ~ 66190766 (+) | False | LOC110494051 |
| TU196344 | other | upstream | 62762 | 65935596 ~ 65936133 (+) | True | G172639 |
| TU196056 | other | upstream | 357919 | 65593517 ~ 65640976 (+) | False | jph3 |
| TU196057 | other | upstream | 357919 | 65593517 ~ 65640976 (+) | True | jph3 |
| TU196081 | other | upstream | 462108 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU193612 | other | upstream | 2120662 | 63873248 ~ 63878233 (+) | True | G170150 |
| TU196564 | other | downstream | 263062 | 66262626 ~ 66266023 (+) | True | LOC110494096 |
| TU197812 | other | downstream | 742256 | 66741820 ~ 66742213 (+) | True | G173938 |
| TU197931 | other | downstream | 955960 | 66955524 ~ 66972455 (+) | False | LOC110494451 |
| TU198150 | other | downstream | 1239326 | 67238890 ~ 67239896 (+) | True | LOC110494472 |
| TU198304 | other | downstream | 1486599 | 67486163 ~ 67488201 (+) | True | hsbp1b |
