Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU196314 |
| length | 1042 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 6 |
| gene id | LOC110494202 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 66359803 ~ 66363985 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU196352 | lncRNA | upstream | 360433 | 65998895 ~ 65999564 (+) | True | LOC110494008 |
| TU196370 | lncRNA | upstream | 389039 | 65965873 ~ 65970958 (+) | True | G172658 |
| TU196342 | lncRNA | upstream | 430318 | 65929364 ~ 65929679 (+) | True | G172637 |
| TU196335 | lncRNA | upstream | 440779 | 65918913 ~ 65919218 (+) | True | G172630 |
| TU196296 | lncRNA | upstream | 489729 | 65869329 ~ 65870268 (+) | True | G172592 |
| TU197656 | lncRNA | downstream | 166645 | 66530115 ~ 66530338 (+) | True | G173804 |
| TU197657 | lncRNA | downstream | 166982 | 66530452 ~ 66530710 (+) | True | G173805 |
| TU197658 | lncRNA | downstream | 168196 | 66531666 ~ 66531887 (+) | True | G173806 |
| TU197660 | lncRNA | downstream | 169988 | 66533458 ~ 66533659 (+) | True | G173808 |
| TU197700 | lncRNA | downstream | 171744 | 66535214 ~ 66535447 (+) | True | G173835 |
| XM_021569009.2 | mRNA | upstream | 2090 | 66354407 ~ 66357907 (+) | False | LOC110494184 |
| XM_021569017.2 | mRNA | upstream | 2090 | 66354407 ~ 66357907 (+) | False | LOC110494184 |
| XM_036953672.1 | mRNA | upstream | 2090 | 66354487 ~ 66357907 (+) | True | LOC110494184 |
| XM_036934652.1 | mRNA | upstream | 19375 | 66338871 ~ 66340622 (+) | True | LOC118937288 |
| XR_002469234.2 | mRNA | upstream | 21551 | 66334512 ~ 66338446 (+) | True | LOC110494179 |
| XM_036953676.1 | mRNA | downstream | 6320 | 66369790 ~ 66374755 (+) | False | LOC110494222 |
| XM_036953673.1 | mRNA | downstream | 6321 | 66369791 ~ 66374755 (+) | False | LOC110494222 |
| XM_036953677.1 | mRNA | downstream | 6322 | 66369792 ~ 66374755 (+) | False | LOC110494222 |
| XM_036953675.1 | mRNA | downstream | 6323 | 66369793 ~ 66374755 (+) | False | LOC110494222 |
| XM_036953674.1 | mRNA | downstream | 6387 | 66369857 ~ 66374755 (+) | False | LOC110494222 |
| TU196564 | other | upstream | 93974 | 66262626 ~ 66266023 (+) | True | LOC110494096 |
| TU196344 | other | upstream | 423864 | 65935596 ~ 65936133 (+) | True | G172639 |
| TU196056 | other | upstream | 719021 | 65593517 ~ 65640976 (+) | False | jph3 |
| TU196057 | other | upstream | 719021 | 65593517 ~ 65640976 (+) | True | jph3 |
| TU196081 | other | upstream | 823210 | 65531146 ~ 65536787 (+) | True | map1lc3b |
| TU197812 | other | downstream | 378350 | 66741820 ~ 66742213 (+) | True | G173938 |
| TU197931 | other | downstream | 592054 | 66955524 ~ 66972455 (+) | False | LOC110494451 |
| TU198150 | other | downstream | 875420 | 67238890 ~ 67239896 (+) | True | LOC110494472 |
| TU198304 | other | downstream | 1122693 | 67486163 ~ 67488201 (+) | True | hsbp1b |
| TU200669 | other | downstream | 2497368 | 68860838 ~ 68861368 (+) | True | G176612 |
