Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU198152 |
| length | 999 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 1 |
| gene id | has3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 67216792 ~ 67230218 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0030213 | hyaluronan biosynthetic process | biological_process |
| GO:0050501 | hyaluronan synthase activity | molecular_function |
67,226,000
67,226,400
67,226,800
67,227,200
67,227,600
67,228,000
67,228,400
67,228,800
67,229,200
67,229,600
67,230,000
67,230,400
67,230,800
67,231,200
67,231,600
67,232,000
NC_048566.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU198155 | lncRNA | upstream | 575 | 67227852 ~ 67228503 (+) | False | has3 |
| TU198145 | lncRNA | upstream | 14191 | 67214653 ~ 67214887 (+) | True | G174244 |
| TU198125 | lncRNA | upstream | 14760 | 67202872 ~ 67214318 (+) | True | tango6 |
| TU198052 | lncRNA | upstream | 141019 | 67087793 ~ 67088059 (+) | True | G174155 |
| TU198048 | lncRNA | upstream | 145743 | 67082972 ~ 67083335 (+) | True | G174151 |
| TU198159 | lncRNA | downstream | 5496 | 67235572 ~ 67236179 (+) | True | G174254 |
| TU198173 | lncRNA | downstream | 26877 | 67256953 ~ 67257215 (+) | True | G174268 |
| TU198178 | lncRNA | downstream | 33099 | 67263175 ~ 67263455 (+) | True | G174273 |
| TU198227 | lncRNA | downstream | 124002 | 67354078 ~ 67354509 (+) | True | G174319 |
| TU198235 | lncRNA | downstream | 138078 | 67368154 ~ 67402620 (+) | True | G174327 |
| XM_021569556.2 | mRNA | upstream | 14730 | 67181100 ~ 67214348 (+) | False | tango6 |
| NM_001185030.1 | mRNA | upstream | 48319 | 67179055 ~ 67180759 (+) | True | il17c2 |
| XM_036933501.1 | mRNA | upstream | 48672 | 67177661 ~ 67180406 (+) | False | il17c2 |
| XM_036953889.1 | mRNA | upstream | 52556 | 67135942 ~ 67176522 (+) | True | LOC110494462 |
| XM_036953899.1 | mRNA | upstream | 52735 | 67135942 ~ 67176343 (+) | False | LOC110494462 |
| XM_021569567.2 | mRNA | downstream | 2202 | 67232278 ~ 67239902 (+) | False | LOC110494472 |
| XM_021569688.2 | mRNA | downstream | 256052 | 67486128 ~ 67488205 (+) | False | hsbp1b |
| XM_021569726.2 | mRNA | downstream | 294334 | 67524410 ~ 67536975 (+) | True | LOC110494554 |
| XM_036954070.1 | mRNA | downstream | 1173583 | 68403659 ~ 68551466 (+) | False | LOC110501822 |
| XM_036954080.1 | mRNA | downstream | 1173583 | 68403659 ~ 68551466 (+) | False | LOC110501822 |
| TU197931 | other | upstream | 256623 | 66955524 ~ 66972455 (+) | False | LOC110494451 |
| TU197812 | other | upstream | 486865 | 66741820 ~ 66742213 (+) | True | G173938 |
| TU196564 | other | upstream | 963055 | 66262626 ~ 66266023 (+) | True | LOC110494096 |
| TU196344 | other | upstream | 1292945 | 65935596 ~ 65936133 (+) | True | G172639 |
| TU196057 | other | upstream | 1588102 | 65593517 ~ 65640976 (+) | True | jph3 |
| TU198150 | other | downstream | 8814 | 67238890 ~ 67239896 (+) | True | LOC110494472 |
| TU198304 | other | downstream | 256087 | 67486163 ~ 67488201 (+) | True | hsbp1b |
| TU200669 | other | downstream | 1630762 | 68860838 ~ 68861368 (+) | True | G176612 |
| TU200792 | other | downstream | 1726187 | 68956263 ~ 68957886 (+) | True | G176725 |
| TU201174 | other | downstream | 2226482 | 69456558 ~ 69457433 (+) | True | G177067 |
