RNA id: NM_001257301.1


Basic Information

Item Value
RNA id NM_001257301.1
length 943
RNA type mRNA
GC content 0.46
exon number 6
gene id il34
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 68980410 ~ 69003899 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GCTAACAAGGAGCGAGAAGGACCTTGTGGTGCTCTGGAAAAGTGTGTGATCTGAGTCGGAGGCCTCCAGCGTGTTTAAACGGGCATAAATTGGAGTATGGTCCGGTCAACAGCCTGGCTCCTGGGAGCTCTATTGGGTTTGATATGTGTACTACCTCTTGTTTTGATGACACCCAGAACTGCCCAGTGCACGTCTTTGAAGACATTGGAAAACAAACTCATAGGCAGAAGACGTAACATGAAACACAATTTACCCATTAATTACACCATCAGAGTTCACTATGAGGAGGTCTTCAAACTCAGCAATATCAGCAAGCTGAGGGCGAGGGTGGAGGATCTGGAAGACGGGGACCTGCAGGATGTGTGGCTGTTGGTCAACCGGGAGGTGTTGAAGAGGATTCTGAGGGTCTTGCCAGTGAGACACCCCTCCTACAAGTACACCACCGACCTGGAGGATCTCTTCAGGAAGGTCCAGCAGGTGTTCCCACCACAGACTGATGAGAGAGAGCCACCAGAGCGAATAGAGGAGATCTACAAAAGGGTTAAGGAGATTGACTCAAAAGGCTGGAGGTTCGTGACCCCCAAATCTCTGTTGGATAACTGCTATCGGACAATGCACTGTCTCTTCAAAGACTGCTTTTCCAGtgaagacagagagcaagacTATTGTGGCTTACCTCACTGGCGGAAGGGCAGAAAGAGACTACAGTAAACCTGAGAAGGGCGCTATTGTTTTCATAtgtatatttataatatattgTCTACTGATGTTTATGTTCTGTGTTTTGATTGCGGGTTCTAGATGTGTTTAGACAGTTGTATGGTATAGGGCAGGTGACTATGCTCAAGCAGAGCGCGATATAGCATTTCTATTttaattattttatatttttttgcaatCAGGGAACACTTATGGCTGACATAGGTATTAGCAACCGTTGCCC

Function

GO:

id name namespace
GO:0008284 positive regulation of cell population proliferation biological_process
GO:0001934 positive regulation of protein phosphorylation biological_process
GO:0005615 extracellular space cellular_component
GO:0005157 macrophage colony-stimulating factor receptor binding molecular_function

KEGG:

id description
K22633 IL34; interleukin 34

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU201274 lncRNA downstream 2080 68978979 ~ 68979457 (-) True G177154
TU200774 lncRNA downstream 66254 68915008 ~ 68915283 (-) True G176712
TU200750 lncRNA downstream 87847 68885939 ~ 68893690 (-) True G176688
TU200727 lncRNA downstream 120086 68861177 ~ 68861451 (-) True G176668
TU200723 lncRNA downstream 124798 68856535 ~ 68856739 (-) True G176664
TU201312 lncRNA upstream 53975 69049020 ~ 69106218 (-) True G177192
TU201341 lncRNA upstream 117222 69112267 ~ 69113991 (-) True LOC110494649
TU201365 lncRNA upstream 121822 69116867 ~ 69117163 (-) True G177244
TU201393 lncRNA upstream 200496 69195541 ~ 69195986 (-) True G177272
TU201328 lncRNA upstream 315466 69310511 ~ 69311709 (-) True G177207
XM_021569803.2 mRNA downstream 3839 68951337 ~ 68977698 (-) False lonp2
XM_021569811.2 mRNA downstream 3839 68951337 ~ 68977698 (-) True lonp2
XM_036954048.1 mRNA downstream 788644 67666186 ~ 68192893 (-) False cdh13
XM_036954055.1 mRNA downstream 788644 67666186 ~ 68192893 (-) True cdh13
XM_021569702.2 mRNA downstream 1457746 67491429 ~ 67523791 (-) True zgc:173742
XM_021569841.2 mRNA upstream 14805 69009850 ~ 69051084 (-) False sf3b3
XM_021569849.2 mRNA upstream 14805 69009850 ~ 69059398 (-) True sf3b3
XM_021569882.2 mRNA upstream 101697 69096742 ~ 69111871 (-) True aars1
XM_021569909.2 mRNA upstream 118735 69113780 ~ 69128027 (-) False LOC110494649
XR_005037658.1 mRNA upstream 119451 69114496 ~ 69128035 (-) False LOC110494649
TU198454 other downstream 2288687 66692408 ~ 66692850 (-) True G174505
TU197536 other downstream 2590771 66375226 ~ 66390766 (-) True G173696
TU197514 other downstream 2643151 66335412 ~ 66338386 (-) True G173675
TU197458 other downstream 2683223 66277821 ~ 66298314 (-) False LOC110494122
TU197229 other downstream 3059308 65921850 ~ 65922229 (-) True G173431
TU201626 other upstream 596090 69591135 ~ 69591722 (-) True G177487
TU201996 other upstream 698564 69693609 ~ 69704399 (-) True LOC110494902
TU202994 other upstream 1565477 70560522 ~ 70560855 (-) True LOC110501848
TU203498 other upstream 1774113 70769158 ~ 70772536 (-) True fam169b
TU203550 other upstream 1910327 70905372 ~ 70906254 (-) True G179215

Expression Profile