RNA id: trnah-gug-2


Basic Information

Item Value
RNA id trnah-gug-2
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnah-gug-2
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73455432 ~ 73455503 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gccgtgatcgtatagtggttagtactctgcgttgtggccgcagcaaccccggttcgaatccgggtcacggca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206558 lncRNA upstream 40711 73413662 ~ 73414721 (+) True G182020
TU206492 lncRNA upstream 88449 73365579 ~ 73366983 (+) True G181965
TU206529 lncRNA upstream 115360 73339463 ~ 73340072 (+) True G181994
TU206523 lncRNA upstream 126571 73327462 ~ 73328861 (+) True G181989
TU206473 lncRNA upstream 158749 73269027 ~ 73296683 (+) True G181948
TU206665 lncRNA downstream 118102 73573605 ~ 73573921 (+) True G182124
TU206576 lncRNA downstream 131601 73587104 ~ 73587665 (+) True G182037
TU206699 lncRNA downstream 180124 73635627 ~ 73636093 (+) True G182154
TU206700 lncRNA downstream 181047 73636550 ~ 73636988 (+) True G182155
TU206757 lncRNA downstream 250829 73706332 ~ 73766435 (+) True G182209
XM_021571375.2 mRNA upstream 570 73436134 ~ 73454862 (+) False malt3
XM_021571366.2 mRNA upstream 570 73441465 ~ 73454862 (+) True malt3
XM_021571345.2 mRNA upstream 36594 73409052 ~ 73418838 (+) False slc28a1
XM_036955208.1 mRNA upstream 36594 73409112 ~ 73418838 (+) False slc28a1
XM_021571335.2 mRNA upstream 36594 73409114 ~ 73418838 (+) False slc28a1
XM_036955241.1 mRNA downstream 1166 73456669 ~ 73578180 (+) False LOC110501876
XM_036955248.1 mRNA downstream 1172 73456675 ~ 73578179 (+) False LOC110501876
XM_021571436.2 mRNA downstream 277892 73733395 ~ 73737729 (+) False LOC110495913
XM_021571480.2 mRNA downstream 301469 73756972 ~ 73768531 (+) True idh2
XM_021571519.2 mRNA downstream 428048 73883551 ~ 73984737 (+) False LOC110495946
TU206530 other upstream 113155 73341380 ~ 73342277 (+) False G181995
TU206531 other upstream 113155 73341707 ~ 73342277 (+) True G181995
TU205289 other upstream 1201705 72253438 ~ 72253727 (+) True LOC110533853
TU204899 other upstream 1390237 72059717 ~ 72065195 (+) False LOC110495604
TU206574 other downstream 121262 73576765 ~ 73580075 (+) True LOC110501876
TU206683 other downstream 151389 73606892 ~ 73610237 (+) True G182139
TU206688 other downstream 167033 73622536 ~ 73624518 (+) True G182144
TU208054 other downstream 1074146 74529649 ~ 74535026 (+) True G183361
TU208178 other downstream 1256078 74711581 ~ 74714114 (+) False LOC110496107