Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00027854 |
| length | 1005 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 3 |
| gene id | XLOC_013948 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 14113886 ~ 14127134 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0010482 | regulation of epidermal cell division | biological_process |
| GO:0003334 | keratinocyte development | biological_process |
| GO:0030054 | cell junction | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-100922-285 | Predicted to be involved in regulation of epidermal cell division. Predicted to act upstream of or within keratinocyte development. Predicted to be active in cell junction. Human ortholog(s) of this gene implicated in ectodermal dysplasia 12. Orthologous to human KDF1 (keratinocyte differentiation factor 1). |
| ensembl_id | ENSDART00000192057 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00027851 | lncRNA | upstream | 5731 | 14109501 ~ 14110107 (+) | False | XLOC_013947 |
| TCONS_00027846 | lncRNA | upstream | 309965 | 13796592 ~ 13805873 (+) | True | XLOC_013943 |
| TCONS_00029879 | lncRNA | upstream | 480028 | 13631325 ~ 13635810 (+) | True | XLOC_013942 |
| TCONS_00027844 | lncRNA | upstream | 695361 | 13414676 ~ 13420477 (+) | True | XLOC_013940 |
| TCONS_00029878 | lncRNA | upstream | 866589 | 13230383 ~ 13249249 (+) | True | XLOC_013938 |
| TCONS_00029880 | lncRNA | downstream | 724618 | 14850817 ~ 14871231 (+) | False | XLOC_013953 |
| TCONS_00029881 | lncRNA | downstream | 899717 | 15025916 ~ 15027342 (+) | True | XLOC_013955 |
| TCONS_00029882 | lncRNA | downstream | 1175489 | 15301688 ~ 15303833 (+) | True | XLOC_013956 |
| TCONS_00027868 | lncRNA | downstream | 1317182 | 15443381 ~ 15452953 (+) | False | XLOC_013957 |
| TCONS_00029883 | lncRNA | downstream | 2585627 | 16711826 ~ 16712299 (+) | False | XLOC_013967 |
| TCONS_00027850 | mRNA | upstream | 2871 | 14109348 ~ 14112967 (+) | False | XLOC_013947 |
| TCONS_00027849 | mRNA | upstream | 53851 | 14059349 ~ 14061987 (+) | True | XLOC_013946 |
| TCONS_00027848 | mRNA | upstream | 79946 | 13994563 ~ 14035892 (+) | True | XLOC_013945 |
| TCONS_00027845 | mRNA | upstream | 688847 | 13420884 ~ 13426991 (+) | True | XLOC_013941 |
| TCONS_00027843 | mRNA | upstream | 701939 | 13410916 ~ 13413899 (+) | False | XLOC_013940 |
| TCONS_00027855 | mRNA | downstream | 31876 | 14158075 ~ 14169457 (+) | False | XLOC_013949 |
| TCONS_00027856 | mRNA | downstream | 31894 | 14158093 ~ 14162230 (+) | True | XLOC_013949 |
| TCONS_00027857 | mRNA | downstream | 225361 | 14351560 ~ 14438821 (+) | False | XLOC_013950 |
| TCONS_00027858 | mRNA | downstream | 226133 | 14352332 ~ 14435254 (+) | False | XLOC_013950 |
| TCONS_00027860 | mRNA | downstream | 328107 | 14454306 ~ 14470811 (+) | True | XLOC_013951 |
| TCONS_00027852 | other | upstream | 2929 | 14110971 ~ 14112909 (+) | True | XLOC_013947 |
| TCONS_00027847 | other | upstream | 281845 | 13833879 ~ 13833993 (+) | True | XLOC_013944 |
| TCONS_00027836 | other | upstream | 1170872 | 12944850 ~ 12944966 (+) | True | XLOC_013935 |
| TCONS_00027817 | other | upstream | 2837309 | 11278413 ~ 11278529 (+) | True | XLOC_013922 |
| TCONS_00027800 | other | upstream | 3280217 | 10832092 ~ 10835621 (+) | False | XLOC_013912 |
| TCONS_00027859 | other | downstream | 268680 | 14394879 ~ 14398687 (+) | True | XLOC_013950 |
| TCONS_00027862 | other | downstream | 724634 | 14850833 ~ 14852304 (+) | True | XLOC_013953 |
| TCONS_00027879 | other | downstream | 1935627 | 16061826 ~ 16061961 (+) | True | XLOC_013963 |
| TCONS_00027881 | other | downstream | 1938264 | 16064463 ~ 16084101 (+) | False | XLOC_013964 |
| TCONS_00027883 | other | downstream | 1942771 | 16068970 ~ 16069103 (+) | True | XLOC_013965 |
