Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU210076 |
| length | 451 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 4 |
| gene id | ptprq |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 75798506 ~ 75842546 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210070 | lncRNA | upstream | 42196 | 75797248 ~ 75797581 (+) | True | otogl |
| TU210067 | lncRNA | upstream | 58625 | 75773766 ~ 75781152 (+) | True | G185186 |
| TU209784 | lncRNA | upstream | 178135 | 75656200 ~ 75661642 (+) | True | gcsha |
| TU209791 | lncRNA | upstream | 180721 | 75657844 ~ 75659056 (+) | True | G184959 |
| TU209767 | lncRNA | upstream | 230050 | 75609516 ~ 75609727 (+) | True | G184938 |
| TU210089 | lncRNA | downstream | 2082 | 75842626 ~ 75843199 (+) | False | G185204 |
| TU210088 | lncRNA | downstream | 2302 | 75842846 ~ 75843401 (+) | True | G185204 |
| TU210090 | lncRNA | downstream | 3217 | 75843761 ~ 75845575 (+) | False | G185205 |
| TU210091 | lncRNA | downstream | 3217 | 75843761 ~ 75844067 (+) | True | G185205 |
| TU210097 | lncRNA | downstream | 15585 | 75856129 ~ 75856857 (+) | True | G185211 |
| XM_036955641.1 | mRNA | upstream | 8305 | 75829380 ~ 75831472 (+) | True | LOC118942030 |
| XM_036934224.1 | mRNA | upstream | 42035 | 75730818 ~ 75797742 (+) | False | otogl |
| XR_005037899.1 | mRNA | upstream | 102282 | 75736814 ~ 75737495 (+) | True | LOC118942028 |
| XM_036934208.1 | mRNA | upstream | 109559 | 75726061 ~ 75730218 (+) | True | LOC110496246 |
| XM_021572025.2 | mRNA | upstream | 117206 | 75719803 ~ 75722571 (+) | True | LOC110496239 |
| XM_021572129.2 | mRNA | downstream | 53645 | 75894189 ~ 75902042 (+) | False | LOC110496295 |
| XM_021572122.2 | mRNA | downstream | 53811 | 75894355 ~ 75902042 (+) | False | LOC110496295 |
| XM_021572113.2 | mRNA | downstream | 53813 | 75894357 ~ 75902042 (+) | True | LOC110496295 |
| XM_021572140.2 | mRNA | downstream | 75093 | 75915637 ~ 75935997 (+) | True | LOC110496313 |
| XM_036955699.1 | mRNA | downstream | 99225 | 75939769 ~ 75982606 (+) | False | LOC110496319 |
| TU209106 | other | upstream | 752370 | 75086622 ~ 75087407 (+) | False | LOC110496136 |
| TU209105 | other | upstream | 798687 | 75037252 ~ 75041090 (+) | False | LOC110496136 |
| TU208835 | other | upstream | 953277 | 74886098 ~ 74886500 (+) | True | LOC110496116 |
| TU208178 | other | upstream | 1125663 | 74711581 ~ 74714114 (+) | False | LOC110496107 |
| TU208054 | other | upstream | 1304751 | 74529649 ~ 74535026 (+) | True | G183361 |
| TU210196 | other | downstream | 327113 | 76167657 ~ 76169295 (+) | False | LOC110496459 |
| TU210197 | other | downstream | 327113 | 76167657 ~ 76169295 (+) | True | LOC110496459 |
| TU210392 | other | downstream | 593273 | 76433817 ~ 76434615 (+) | True | G185462 |
| TU210492 | other | downstream | 693834 | 76534378 ~ 76606975 (+) | True | G185549 |
| TU210702 | other | downstream | 989869 | 76830413 ~ 76832500 (+) | True | G185718 |
