Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021573342.2 |
| length | 1006 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | tmem17 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 81034004 ~ 81037186 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007224 | smoothened signaling pathway | biological_process |
| GO:0036038 | MKS complex | cellular_component |
| GO:0060170 | ciliary membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K19384 | TMEM17; transmembrane protein 17 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU217119 | lncRNA | downstream | 113128 | 80915679 ~ 80920876 (-) | False | G191669 |
| TU217120 | lncRNA | downstream | 113128 | 80915679 ~ 80920876 (-) | True | G191669 |
| TU217116 | lncRNA | downstream | 114076 | 80914658 ~ 80919928 (-) | False | G191668 |
| TU217117 | lncRNA | downstream | 114076 | 80914658 ~ 80919928 (-) | True | G191668 |
| TU217027 | lncRNA | downstream | 208258 | 80805156 ~ 80825746 (-) | True | G191582 |
| TU217191 | lncRNA | upstream | 12355 | 81049541 ~ 81052986 (-) | True | G191727 |
| TU217246 | lncRNA | upstream | 46375 | 81083561 ~ 81086179 (-) | False | G191777 |
| TU217247 | lncRNA | upstream | 46971 | 81084157 ~ 81085026 (-) | True | G191777 |
| TU217309 | lncRNA | upstream | 105238 | 81142424 ~ 81185888 (-) | False | G191832 |
| TU217303 | lncRNA | upstream | 140936 | 81178122 ~ 81185700 (-) | False | G191832 |
| XM_021573329.2 | mRNA | downstream | 6574 | 81024623 ~ 81027430 (-) | True | LOC110497288 |
| XM_021573315.2 | mRNA | downstream | 23090 | 81008700 ~ 81010914 (-) | True | LOC110497280 |
| LOC110497262 | mRNA | downstream | 34999 | 80995022 ~ 80999005 (-) | True | LOC110497262 |
| XM_021573203.2 | mRNA | downstream | 257646 | 80766303 ~ 80776358 (-) | False | accs |
| XM_021573219.2 | mRNA | downstream | 257646 | 80766303 ~ 80776358 (-) | True | accs |
| XM_021573503.2 | mRNA | upstream | 155378 | 81192564 ~ 81194099 (-) | False | cart2 |
| XR_005038428.1 | mRNA | upstream | 201844 | 81239030 ~ 81240770 (-) | False | LOC118942622 |
| XM_021573625.2 | mRNA | upstream | 268895 | 81306081 ~ 81309081 (-) | True | LOC110497492 |
| NM_001124507.1 | mRNA | upstream | 276883 | 81314069 ~ 81323099 (-) | True | sycp3 |
| XM_036933394.1 | mRNA | upstream | 294812 | 81331998 ~ 81338259 (-) | False | actr6 |
| TU217118 | other | downstream | 112589 | 80915679 ~ 80921415 (-) | False | G191669 |
| TU216232 | other | downstream | 481520 | 80552127 ~ 80552484 (-) | True | G190857 |
| TU215157 | other | downstream | 1273377 | 79760039 ~ 79760627 (-) | True | G189806 |
| TU214582 | other | downstream | 1667435 | 79365849 ~ 79366569 (-) | True | G189256 |
| TU214411 | other | downstream | 1809006 | 79223230 ~ 79224998 (-) | True | G189093 |
| TU217319 | other | upstream | 155342 | 81192528 ~ 81193845 (-) | True | cart2 |
| TU219436 | other | upstream | 1864454 | 82901640 ~ 82912504 (-) | True | G193745 |
| TU219446 | other | upstream | 1968644 | 83005830 ~ 83007976 (-) | True | G193755 |
| TU219891 | other | upstream | 2182836 | 83220022 ~ 83223144 (-) | True | LOC110502187 |
| TU220290 | other | upstream | 2578380 | 83615566 ~ 83616034 (-) | True | G194491 |
