Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021574820.2 |
| length | 1501 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 9 |
| gene id | LOC110498193 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 85831193 ~ 85836115 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0060036 | notochord cell vacuolation | biological_process |
| GO:0060041 | retina development in camera-type eye | biological_process |
| GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | cellular_component |
| GO:0046961 | proton-transporting ATPase activity, rotational mechanism | molecular_function |
| id | description |
|---|---|
| K02150 | ATPeV1E, ATP6E; V-type H+-transporting ATPase subunit E |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222889 | lncRNA | upstream | 53255 | 85775488 ~ 85777938 (+) | True | G196905 |
| TU222859 | lncRNA | upstream | 227703 | 85602573 ~ 85603490 (+) | True | G196877 |
| TU222791 | lncRNA | upstream | 328969 | 85501891 ~ 85502224 (+) | True | G196816 |
| TU222766 | lncRNA | upstream | 369665 | 85460837 ~ 85461528 (+) | True | G196791 |
| TU222763 | lncRNA | upstream | 373059 | 85457908 ~ 85458134 (+) | True | G196788 |
| TU222974 | lncRNA | downstream | 5902 | 85842017 ~ 85843259 (+) | True | G196990 |
| TU223016 | lncRNA | downstream | 114304 | 85950419 ~ 85950944 (+) | True | G197031 |
| TU223027 | lncRNA | downstream | 122051 | 85958166 ~ 85958565 (+) | False | G197036 |
| TU223028 | lncRNA | downstream | 122051 | 85958166 ~ 85961475 (+) | True | G197036 |
| TU223030 | lncRNA | downstream | 123687 | 85959802 ~ 85963597 (+) | False | G197037 |
| XM_036957605.1 | mRNA | upstream | 66162 | 85755625 ~ 85765031 (+) | False | bida |
| XM_021574806.2 | mRNA | upstream | 66174 | 85755640 ~ 85765019 (+) | True | bida |
| XM_021574777.2 | mRNA | upstream | 76982 | 85748761 ~ 85754211 (+) | False | wee2 |
| XM_021574773.2 | mRNA | upstream | 76982 | 85748885 ~ 85754211 (+) | True | wee2 |
| XM_021574765.2 | mRNA | upstream | 96565 | 85727985 ~ 85734628 (+) | True | agk |
| XM_021574851.2 | mRNA | downstream | 9753 | 85845868 ~ 85900894 (+) | False | LOC110498211 |
| XM_021574842.2 | mRNA | downstream | 9754 | 85845869 ~ 85900894 (+) | True | LOC110498211 |
| XM_021574876.2 | mRNA | downstream | 72582 | 85908697 ~ 85915458 (+) | True | LOC110498230 |
| XM_036957703.1 | mRNA | downstream | 180772 | 86016887 ~ 86034851 (+) | False | LOC110498298 |
| XM_036957686.1 | mRNA | downstream | 180782 | 86016897 ~ 86034847 (+) | False | LOC110498298 |
| TU222039 | other | upstream | 811159 | 85010464 ~ 85020034 (+) | True | LOC110498034 |
| TU220995 | other | upstream | 1230869 | 84596410 ~ 84600324 (+) | True | G195155 |
| TU220190 | other | upstream | 2271595 | 83558920 ~ 83559598 (+) | True | G194395 |
| TU219583 | other | upstream | 2706228 | 83119327 ~ 83124965 (+) | True | LOC110497837 |
| TU218970 | other | upstream | 3176763 | 82652633 ~ 82654430 (+) | True | G193339 |
| TU223067 | other | downstream | 299501 | 86135616 ~ 86136608 (+) | True | G197069 |
| TU224599 | other | downstream | 1201396 | 87037511 ~ 87039236 (+) | True | G198417 |
| TU224773 | other | downstream | 1314087 | 87150202 ~ 87150490 (+) | True | G198575 |
| TU225027 | other | downstream | 1657508 | 87493623 ~ 87496735 (+) | True | G198784 |
| TU225054 | other | downstream | 1699821 | 87535936 ~ 87536928 (+) | True | G198811 |
