Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036990379.1 |
| length | 1190 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | wt-t1b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 87946473 ~ 87966277 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU225532 | lncRNA | upstream | 103145 | 87855403 ~ 87859905 (+) | True | G199218 |
| TU225480 | lncRNA | upstream | 158364 | 87802075 ~ 87804686 (+) | True | G199174 |
| TU225449 | lncRNA | upstream | 200253 | 87762579 ~ 87762797 (+) | True | G199144 |
| TU225443 | lncRNA | upstream | 205381 | 87757264 ~ 87757669 (+) | True | G199138 |
| TU225439 | lncRNA | upstream | 210521 | 87752315 ~ 87752529 (+) | True | G199134 |
| TU225740 | lncRNA | downstream | 676 | 87966953 ~ 87967511 (+) | True | G199391 |
| TU225918 | lncRNA | downstream | 219153 | 88185430 ~ 88194347 (+) | True | G199542 |
| TU226113 | lncRNA | downstream | 290930 | 88257207 ~ 88257452 (+) | True | G199731 |
| TU226122 | lncRNA | downstream | 296355 | 88262632 ~ 88262883 (+) | True | G199740 |
| TU226125 | lncRNA | downstream | 299375 | 88265652 ~ 88266097 (+) | True | G199743 |
| XM_021575680.2 | mRNA | upstream | 31411 | 87912532 ~ 87931639 (+) | False | LOC110498941 |
| XM_021575688.2 | mRNA | upstream | 31593 | 87919127 ~ 87931457 (+) | True | LOC110498941 |
| XM_036958231.1 | mRNA | upstream | 609347 | 87351440 ~ 87353703 (+) | True | LOC118942948 |
| XM_036958218.1 | mRNA | upstream | 611851 | 87345598 ~ 87351199 (+) | True | LOC110498866 |
| XR_005038646.1 | mRNA | upstream | 621159 | 87340910 ~ 87341891 (+) | True | LOC118942946 |
| XM_021575704.2 | mRNA | downstream | 83821 | 88050098 ~ 88070895 (+) | False | LOC110498955 |
| XM_021575713.2 | mRNA | downstream | 85077 | 88051354 ~ 88070895 (+) | False | LOC110498955 |
| XM_021575759.2 | mRNA | downstream | 85078 | 88051355 ~ 88070895 (+) | False | LOC110498955 |
| XM_036958395.1 | mRNA | downstream | 86901 | 88053178 ~ 88070895 (+) | False | LOC110498955 |
| XM_036958399.1 | mRNA | downstream | 86901 | 88053178 ~ 88070895 (+) | False | LOC110498955 |
| TU225538 | other | upstream | 95083 | 87866877 ~ 87867967 (+) | True | G199223 |
| TU225054 | other | upstream | 426122 | 87535936 ~ 87536928 (+) | True | G198811 |
| TU225027 | other | upstream | 466315 | 87493623 ~ 87496735 (+) | True | G198784 |
| TU224773 | other | upstream | 812560 | 87150202 ~ 87150490 (+) | True | G198575 |
| TU224599 | other | upstream | 923814 | 87037511 ~ 87039236 (+) | True | G198417 |
| TU227536 | other | downstream | 1453492 | 89419769 ~ 89422438 (+) | True | LOC110499234 |
| TU228729 | other | downstream | 2480841 | 90447118 ~ 90447573 (+) | True | G202039 |
| TU228879 | other | downstream | 2750665 | 90716942 ~ 90717421 (+) | True | G202185 |
| TU229614 | other | downstream | 3270748 | 91237025 ~ 91237991 (+) | False | LOC110499641 |
| TU230045 | other | downstream | 3400060 | 91366337 ~ 91539373 (+) | True | mgat4c |
