Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU228335 |
| length | 340 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 3 |
| gene id | LOC110499439 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 89901507 ~ 89922720 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU228359 | lncRNA | downstream | 9074 | 89899650 ~ 89899935 (-) | True | G201735 |
| TU228358 | lncRNA | downstream | 12735 | 89895967 ~ 89896274 (-) | True | G201734 |
| TU228357 | lncRNA | downstream | 13076 | 89895423 ~ 89895933 (-) | True | G201733 |
| TU228310 | lncRNA | downstream | 25771 | 89882860 ~ 89883238 (-) | True | G201699 |
| TU228309 | lncRNA | downstream | 25819 | 89882814 ~ 89883190 (-) | False | G201699 |
| TU228442 | lncRNA | upstream | 113361 | 90023044 ~ 90055065 (-) | True | G201804 |
| TU228924 | lncRNA | upstream | 268601 | 90178284 ~ 90178513 (-) | True | G202227 |
| TU228930 | lncRNA | upstream | 274638 | 90184321 ~ 90184541 (-) | True | G202233 |
| TU228936 | lncRNA | upstream | 281174 | 90190857 ~ 90191116 (-) | True | G202239 |
| TU228937 | lncRNA | upstream | 283653 | 90193336 ~ 90193617 (-) | True | G202240 |
| XM_021576530.2 | mRNA | downstream | 88155 | 89793119 ~ 89820854 (-) | True | LOC110499401 |
| XM_021576488.2 | mRNA | downstream | 145637 | 89751743 ~ 89763372 (-) | True | LOC110499378 |
| XM_021576444.2 | mRNA | downstream | 160864 | 89740189 ~ 89748145 (-) | True | tph2 |
| XM_021576422.2 | mRNA | downstream | 199779 | 89610237 ~ 89709230 (-) | True | LOC110499336 |
| XM_036958645.1 | mRNA | upstream | 135013 | 90044696 ~ 90125003 (-) | True | LOC110499460 |
| XM_036958757.1 | mRNA | upstream | 287548 | 90197231 ~ 90230851 (-) | False | LOC110502310 |
| XM_036958750.1 | mRNA | upstream | 287548 | 90197231 ~ 90230853 (-) | False | LOC110502310 |
| XM_036958746.1 | mRNA | upstream | 287548 | 90197231 ~ 90230855 (-) | False | LOC110502310 |
| XM_036958779.1 | mRNA | upstream | 287548 | 90197231 ~ 90233237 (-) | False | LOC110502310 |
| TU228163 | other | downstream | 299119 | 89606837 ~ 89609890 (-) | True | LOC110499346 |
| TU225173 | other | downstream | 2582540 | 87322139 ~ 87326469 (-) | True | G198912 |
| TU224521 | other | downstream | 3005053 | 86903036 ~ 86903956 (-) | True | G198342 |
| TU223618 | other | downstream | 3945344 | 85959845 ~ 85963665 (-) | True | G197554 |
| TU223549 | other | downstream | 4065516 | 85836299 ~ 85843493 (-) | True | G197498 |
| TU228979 | other | upstream | 467874 | 90377557 ~ 90441425 (-) | True | G202279 |
| TU230773 | other | upstream | 1679529 | 91589212 ~ 91591049 (-) | True | G203915 |
| TU230896 | other | upstream | 1877504 | 91787187 ~ 91788103 (-) | True | G204024 |
| TU231426 | other | upstream | 2488377 | 92398060 ~ 92439601 (-) | False | LOC110499897 |
| TU232213 | other | upstream | 3052361 | 92962044 ~ 92962934 (-) | True | G205192 |
