RNA id: XM_036959614.1


Basic Information

Item Value
RNA id XM_036959614.1
length 1688
RNA type mRNA
GC content 0.50
exon number 7
gene id LOC110500174
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94505382 ~ 94513747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATGTACCCCAACGCGTTAATGACACAGGTGGCGCGATCGAACCCGTTCAGCGCTCCCGGTTTCACTCTCCAGAAAGTCGAGGAGCCATCACAAAGTCTTACTGCCGATCATGGACCAAGAACACGCACATTGGCTGCGGCTGCAGTGGCCGATTCTGACGTTAGCTGTGAGTTTGGCTCTAAGAAATACTATGCCTTGTGCGGCTTCGGCGGCATCCTCAGCTGTGGGATCACACACACGGCGGTCGTTCCCCTTGACCTGGTCAAGTGCCGCCTGCAGGTGGACCCAGACAAGTACAAGAGCATCTTCAAGGGTTTCTCCATCACCATTAAAGAGGATGGCATGAGAGGGCTGGCTAAGGGCTGGGCTCCCACCTTCATCGGTTACTCCATGCAGGGTCTCTGCAAGTTTGGCTTCTATGAGGTGTTCAAGATCACCTACAGCGACATGATCGGAGAGGAAAACACCTACCTGTGGAGGACCTCTCTCTACCTGGCTGCGTCTGCCAGTGCAGAGTTCTTCGCTGACATCGCCCTGGCCCCAATGGAGGCGTGTAAAGTGCGTATTCAGACCCAGCCCGGCTACGCTAACACCCTCAGACAGTGTGCCCCTAAGATGTTCGCCGAGGAGGGAGTCTGGGCTTTCTACAAGGGTGTAGTCCCACTGTGGATGAGGCAGATCCCCTACACCATGATGAAGTTTGCCTGCTTTGAGAGGACCGTAGAGCTGCTGTACAAACATGTGGTGCCTAAACCCCGCGCTGAGTGCTCCAAGGGTGAACAGCTGGTCGTCACCTTCGTGGCCGGATACATTGCTGGTGTGTTCTGTGCCATCGTCTCCCACCCTGCTGACTCCGTGGTGTCTGTGCTGAACAAGGAGAGTGGCAGCACCGCCATCGGAGTGCTCAAGAAGCTCGGGCCCAAGGGTGTGTGGAAGGGTCTGGTGGCCCGTATCATCATGATCGGTACCTTGACCGCCCTGCAGTGGTTCATCTACGACTCTGTCAAGGTCTACTTCTGCCTGCCCCGTCCCCCTCCCCCAGAGATGCCCGAGTCCCTCAAGAAGAAGCTGGGGATTACAGAGTAAAGAAACAAAATGGCGGCCTTATCAACAAATATCTATTCAAAATGGCGGCCTTATCAACAGCAATATAAGATGGCGGCCTTCAAACAACACATCCTTAAGTTAACATCCACACTGCACACCGCTATCTGCCTGGTATAGTCATAGCTGTCCTGTTCTGCCTGTAGACCACCTACCCTGGTCTGAGCTACTTCTGCATATTACATTCAGAGCGAAATATGCCATGTAGAACAGACATGCCGCTACGACGTGTAGAATAAAGAATCATGTTGACTCTTATTAGTAGCGTTTCTATATGCGACGTTCCAAAACATTTTCGTACTGAACATGGCCCTGGTCAGCATGAGTTGGGGTCCATTTCATTTAGATTCcagaagtaaactgaaattccacttcttctttttttaaattataatttCTTAATTGAAATTTTAGTTTTTGGAATTGTTTGAAATGAAATTGAACCCAACCCTACTGGTCAAGAGGGAGGAGGGTTCCCTCCTGTGGGGGAATAGAGGGAAGACGACAACACATGCCATCAGGTTAACACCCTACCACAGTTGGTTAATGTtctaataaataaatgaaaatgtgGAAACATttta

Function

GO: NA

KEGG:

id description
K15102 SLC25A3, PHC, PIC; solute carrier family 25 (mitochondrial phosphate transporter), member 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU234112 lncRNA upstream 1319 94504437 ~ 94504639 (+) True G206844
TU233753 lncRNA upstream 15804 94488578 ~ 94490154 (+) True G206556
TU233751 lncRNA upstream 17626 94488131 ~ 94488332 (+) True G206555
TU233750 lncRNA upstream 23647 94482072 ~ 94482311 (+) True G206554
TU233749 lncRNA upstream 23989 94481759 ~ 94481969 (+) True G206553
TU234128 lncRNA downstream 12825 94526572 ~ 94527078 (+) True G206858
TU234129 lncRNA downstream 13689 94527436 ~ 94528029 (+) True G206859
TU234119 lncRNA downstream 25910 94539657 ~ 94556378 (+) True LOC110500196
TU234121 lncRNA downstream 49226 94562973 ~ 94563894 (+) True G206851
TU234168 lncRNA downstream 99366 94613113 ~ 94613397 (+) True G206896
XM_021577366.2 mRNA upstream 1777 94498952 ~ 94504181 (+) True LOC110500169
XM_036959580.1 mRNA upstream 101438 94391364 ~ 94404520 (+) False LOC110500139
XM_036959551.1 mRNA upstream 188303 94300169 ~ 94317655 (+) False LOC110500101
XM_036959594.1 mRNA downstream 814 94514561 ~ 94520141 (+) False LOC110500186
XM_036959602.1 mRNA downstream 927 94514674 ~ 94520141 (+) False LOC110500186
XM_021577399.2 mRNA downstream 1130 94514877 ~ 94520141 (+) False LOC110500186
XM_036959608.1 mRNA downstream 1130 94514877 ~ 94520141 (+) True LOC110500186
XM_021577436.2 mRNA downstream 15894 94529641 ~ 94541962 (+) False LOC110500215
TU233702 other upstream 68276 94402591 ~ 94437682 (+) True LOC110500139
TU233549 other upstream 404086 94100979 ~ 94101872 (+) False G206389
TU234120 other downstream 43422 94557169 ~ 94562224 (+) True G206850
TU234180 other downstream 118082 94631829 ~ 94632267 (+) True G206908
TU234200 other downstream 192199 94705946 ~ 94706248 (+) True G206926
TU235944 other downstream 1714046 96227793 ~ 96228463 (+) True G208404
TU236415 other downstream 2098682 96612429 ~ 96613459 (+) True G208836

Expression Profile