RNA id: XM_036934797.1


Basic Information

Item Value
RNA id XM_036934797.1
length 1509
RNA type mRNA
GC content 0.68
exon number 2
gene id LOC118937309
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97494344 ~ 97496498 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ccatcaccacccccacccccaccatcaccaccaccaccatcaccacccccaccaccacccccaccaccaccaccaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacccccaccaccatcaccacccccaccacccccaccacccccaccacccccaccaccatcaccacccccaccaccaccaccaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacccccaccaccatcaccacccccaccacccccatcaccacccccaccacccccatcaccacccccactaccaccacccccaccacccccatcaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacccccaccaccatcaccacccccaccacccccaccacccccatcaccaccctcactaccaccacccccacccccaccaccacccctaccacccccatcaccacccccactaccaccacccccaccaccaccaccatcacccccactaccaccacccccacccccactaccacccccacccccaccaccatcaccaccaccaccacccccaccaccacccccaccaccaccaccaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacccccaccaccatcaccacccccaccacccccaccaccatcaccacccccaccaccaccaccaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacccccaccaccatcaccacccccaccacccccatcaccacccccaccacccccaccacccccaccacccccatcaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacccccaccaccatcaccacccccaccacccccaccacccccatcaccaccctcactaccaccacccccaccacccccatcaccacccccactaccaccacccccaccaccaccaccatcacccccactaccaccacccccacccccactaccacccccacccccaccaccatcaccacccccaccaccacccccaccaccacccccaccaccaccaccaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacccccaccaccatcaccacccccaccacccccaccaccatcaccacccccaccaccaccaccaccacccccactaccaccacctccaccaccatcaccacccccactaccaccacccccaccaccatcaccacccccaccacccccatcaccacccccaccacccccatcaccacccccactaccaccacccccaccacccccatcaccaccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU237300 lncRNA downstream 4394 97489715 ~ 97489950 (-) True G209588
TU237297 lncRNA downstream 13573 97480567 ~ 97480771 (-) True G209585
TU237295 lncRNA downstream 18177 97475795 ~ 97476167 (-) True G209583
TU237291 lncRNA downstream 21471 97472634 ~ 97472873 (-) True G209579
TU237288 lncRNA downstream 23618 97470268 ~ 97470726 (-) True G209576
TU237626 lncRNA upstream 36159 97532657 ~ 97533177 (-) True G209818
TU237629 lncRNA upstream 39499 97535997 ~ 97540324 (-) True G209821
TU237690 lncRNA upstream 99230 97595728 ~ 97599133 (-) False G209874
TU237691 lncRNA upstream 99230 97595728 ~ 97599133 (-) False G209874
TU237694 lncRNA upstream 99230 97595728 ~ 97599133 (-) False G209874
XM_036960153.1 mRNA downstream 106391 97089207 ~ 97387953 (-) False LOC110502515
XM_036960120.1 mRNA downstream 416444 97019591 ~ 97077900 (-) False pik3c2g
XM_036960127.1 mRNA downstream 416444 97028186 ~ 97077900 (-) True pik3c2g
XM_036960106.1 mRNA downstream 597271 96647130 ~ 96897073 (-) False LOC110500541
LOC118944190 mRNA upstream 125508 97622006 ~ 97622184 (-) False LOC118944190
LOC118944213 mRNA upstream 129283 97625781 ~ 97625897 (-) True LOC118944213
XR_005039512.1 mRNA upstream 151363 97647861 ~ 97648048 (-) True LOC118944196
XM_036960269.1 mRNA upstream 155708 97652206 ~ 97689832 (-) False LOC118943865
XM_036960208.1 mRNA upstream 158653 97655151 ~ 97660464 (-) True LOC118943862
TU237272 other downstream 77156 97416821 ~ 97417188 (-) True G209560
TU236221 other downstream 1072120 96421866 ~ 96422224 (-) True G208658
TU236021 other downstream 1359872 96134077 ~ 96134472 (-) True G208472
TU235579 other downstream 1661982 95829374 ~ 95832362 (-) True G208077
TU235350 other downstream 1807480 95682037 ~ 95686864 (-) False G207876
TU237607 other upstream 4674 97501172 ~ 97502394 (-) True G209802
TU237655 other upstream 122361 97618859 ~ 97619212 (-) True G209841
TU238041 other upstream 647822 98144320 ~ 98145517 (-) True LOC118936884
TU238753 other upstream 1421950 98918448 ~ 98946069 (-) True LOC118943885
TU238756 other upstream 1445976 98942474 ~ 98943797 (-) True LOC118943882