RNA id: LOC118944194



Basic Information


Item Value
RNA id LOC118944194
length 181
RNA type mRNA
GC content 0.41
exon number 1
gene id LOC118944194
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97682938 ~ 97683118 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


attatttttcccaaaaaaaaaaaaaaaatctgttcttatcagtttaatatctgatacgtcccctaTCTGGGGACcatatattaaattgatttttgGAATAGGGAGATGGAataggggcttgctccgtccactccacgcatcgacctggtattgcagtacctccaggAACGGTGCACCCCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU237737 lncRNA downstream 860 97646404 ~ 97682078 (-) True G209888
TU237741 lncRNA downstream 1817 97680551 ~ 97681121 (-) True G209891
TU237665 lncRNA downstream 6370 97639887 ~ 97676568 (-) True G209850
TU237646 lncRNA downstream 7938 97621775 ~ 97675000 (-) True LOC118944190
TU237734 lncRNA downstream 9688 97637651 ~ 97673250 (-) True G209886
TU237648 lncRNA upstream 16187 97699305 ~ 97723186 (-) False LOC118943868
TU237660 lncRNA upstream 26686 97709804 ~ 97746811 (-) True G209845
TU237744 lncRNA upstream 31073 97714191 ~ 97750984 (-) True G209893
TU237651 lncRNA upstream 32830 97715948 ~ 97723186 (-) False LOC118943868
TU237649 lncRNA upstream 39302 97722420 ~ 97723186 (-) True LOC118943868
XM_036960208.1 mRNA downstream 22474 97655151 ~ 97660464 (-) True LOC118943862
XR_005039512.1 mRNA downstream 34890 97647861 ~ 97648048 (-) True LOC118944196
LOC118944213 mRNA downstream 57041 97625781 ~ 97625897 (-) True LOC118944213
LOC118944190 mRNA downstream 60754 97622006 ~ 97622184 (-) False LOC118944190
XM_036934797.1 mRNA downstream 186440 97494344 ~ 97496498 (-) True LOC118937309
XR_005039177.1 mRNA upstream 7407 97690525 ~ 97691443 (-) False LOC118943869
LOC118944207 mRNA upstream 34622 97717740 ~ 97717837 (-) True LOC118944207
LOC118944209 mRNA upstream 36556 97719674 ~ 97719773 (-) True LOC118944209
XR_005039176.1 mRNA upstream 38874 97721992 ~ 97723183 (-) False LOC118943868
LOC118944208 mRNA upstream 72512 97755630 ~ 97755727 (-) True LOC118944208
TU237655 other downstream 63726 97618859 ~ 97619212 (-) True G209841
TU237607 other downstream 180544 97501172 ~ 97502394 (-) True G209802
TU237272 other downstream 265750 97416821 ~ 97417188 (-) True G209560
TU236221 other downstream 1260714 96421866 ~ 96422224 (-) True G208658
TU236021 other downstream 1548466 96134077 ~ 96134472 (-) True G208472
TU238041 other upstream 461202 98144320 ~ 98145517 (-) True LOC118936884
TU238753 other upstream 1235330 98918448 ~ 98946069 (-) True LOC118943885
TU238756 other upstream 1259356 98942474 ~ 98943797 (-) True LOC118943882
TU238870 other upstream 1342614 99025732 ~ 99026118 (-) True G210765
TU239331 other upstream 1440115 99123233 ~ 99123658 (-) True G211127

Expression Profile