RNA id: LOC118944208



Basic Information


Item Value
RNA id LOC118944208
length 98
RNA type mRNA
GC content 0.48
exon number 1
gene id LOC118944208
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97755630 ~ 97755727 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tatattaaattgatttttgGAATAGGGAGATGGAataggggcttgctccgtccactccacgcatcgacctggtattgcagtacctccaggAACGGTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU237744 lncRNA downstream 4646 97714191 ~ 97750984 (-) True G209893
TU237736 lncRNA downstream 7998 97642207 ~ 97747632 (-) True G209887
TU237660 lncRNA downstream 8819 97709804 ~ 97746811 (-) True G209845
TU237648 lncRNA downstream 32444 97699305 ~ 97723186 (-) False LOC118943868
TU237651 lncRNA downstream 32444 97715948 ~ 97723186 (-) False LOC118943868
TU237657 lncRNA upstream 4162 97759889 ~ 97761086 (-) True LOC118943870
TU237666 lncRNA upstream 8562 97764289 ~ 97769193 (-) True G209851
TU237652 lncRNA upstream 23369 97779096 ~ 97780558 (-) True G209838
TU237752 lncRNA upstream 26330 97782057 ~ 97782475 (-) True G209901
TU237753 lncRNA upstream 26974 97782701 ~ 97782951 (-) True G209902
XR_005039176.1 mRNA downstream 32447 97721992 ~ 97723183 (-) False LOC118943868
LOC118944209 mRNA downstream 35857 97719674 ~ 97719773 (-) True LOC118944209
LOC118944207 mRNA downstream 37793 97717740 ~ 97717837 (-) True LOC118944207
XR_005039177.1 mRNA downstream 64187 97690525 ~ 97691443 (-) False LOC118943869
LOC118944194 mRNA downstream 72512 97682938 ~ 97683118 (-) True LOC118944194
LOC118944211 mRNA upstream 1837 97757564 ~ 97757663 (-) True LOC118944211
XR_005039179.1 mRNA upstream 4155 97759882 ~ 97760800 (-) False LOC118943870
XM_036934496.1 mRNA upstream 372221 98127948 ~ 98145011 (-) False LOC118936884
XM_021578235.2 mRNA upstream 557296 98313023 ~ 98352485 (-) True LOC110500713
XM_021617578.2 mRNA upstream 668288 98424015 ~ 98426658 (-) False lmo2
TU237655 other downstream 136418 97618859 ~ 97619212 (-) True G209841
TU237607 other downstream 253236 97501172 ~ 97502394 (-) True G209802
TU237272 other downstream 338442 97416821 ~ 97417188 (-) True G209560
TU236221 other downstream 1333406 96421866 ~ 96422224 (-) True G208658
TU236021 other downstream 1621158 96134077 ~ 96134472 (-) True G208472
TU238041 other upstream 388593 98144320 ~ 98145517 (-) True LOC118936884
TU238753 other upstream 1162721 98918448 ~ 98946069 (-) True LOC118943885
TU238756 other upstream 1186747 98942474 ~ 98943797 (-) True LOC118943882
TU238870 other upstream 1270005 99025732 ~ 99026118 (-) True G210765
TU239331 other upstream 1367506 99123233 ~ 99123658 (-) True G211127