RNA id: XM_036934485.1


Basic Information

Item Value
RNA id XM_036934485.1
length 1224
RNA type mRNA
GC content 0.61
exon number 1
gene id LOC118936883
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98091289 ~ 98092512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATGCCCTCCCTCTCACATCACCCTCCCATCACAACGCCCTCCCCTCACAACACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTTTCACAACGCCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTTTCACAACGCCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTTTCACAACGCCCTCCCCTCACAATGTCCTCCCTCTCACATCACCCTCCCCTCACAACGCCCTCCCCTCACAACACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTTTCACAACGCCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACAACGCCCTCCTTCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCCCTCACAACACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAATGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTTTCACAACGCCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTTTCACAACGCCCTCCCCTCACAACGCCCTCCTTCTCACAACGCCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTTTCACAACGCCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCTTCTCACATCACCCTCCCCTCACAACGCCCTCCCCTCACAGGGCTACAGTCTCATGCTATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU237503 lncRNA upstream 796 98088789 ~ 98090493 (+) True G209723
TU237588 lncRNA upstream 8871 98081857 ~ 98082418 (+) True G209791
TU237579 lncRNA upstream 43044 98047926 ~ 98048245 (+) True G209784
TU237570 lncRNA upstream 70832 98019869 ~ 98020457 (+) True G209776
TU237510 lncRNA upstream 73419 98015424 ~ 98017870 (+) False LOC118943873
TU237384 lncRNA downstream 14362 98106874 ~ 98108096 (+) True G209633
TU237957 lncRNA downstream 39076 98131588 ~ 98131869 (+) True G210053
TU237958 lncRNA downstream 40897 98133409 ~ 98133672 (+) True G210054
TU237964 lncRNA downstream 46786 98139298 ~ 98139533 (+) True G210060
TU237992 lncRNA downstream 87978 98180490 ~ 98181011 (+) True G210082
XM_036960349.1 mRNA upstream 5142 98026335 ~ 98086147 (+) True LOC118943872
XR_005039180.1 mRNA upstream 73408 98016641 ~ 98017881 (+) False LOC118943873
XM_036960346.1 mRNA upstream 76137 97904868 ~ 98015152 (+) True LOC110500615
XM_036960342.1 mRNA upstream 76138 97904868 ~ 98015151 (+) False LOC110500615
XM_036960337.1 mRNA upstream 311764 97766568 ~ 97779525 (+) True si:dkey-29p10.4
XM_036960371.1 mRNA downstream 69150 98161662 ~ 98269443 (+) False LOC118943874
XM_036960365.1 mRNA downstream 69151 98161663 ~ 98269443 (+) True LOC118943874
NM_001160691.1 mRNA downstream 345373 98437885 ~ 98453966 (+) True gp137
XM_036960394.1 mRNA downstream 447900 98540412 ~ 98572764 (+) False LOC110500731
XM_036960400.1 mRNA downstream 447900 98540412 ~ 98572764 (+) False LOC110500731
TU237549 other upstream 133453 97957244 ~ 97957836 (+) False G209759
TU237387 other upstream 318524 97740061 ~ 97772765 (+) True G209636
TU237386 other upstream 391513 97698111 ~ 97699776 (+) True LOC110500822
TU237326 other upstream 472200 97618617 ~ 97619089 (+) False G209591
TU237298 other upstream 604517 97486476 ~ 97486772 (+) True G209586
TU238408 other downstream 604656 98697168 ~ 98700392 (+) True G210408
TU238278 other downstream 805012 98897524 ~ 98899538 (+) True LOC110510476
TU238516 other downstream 810276 98902788 ~ 98926406 (+) True G210484
TU238947 other downstream 1144866 99237378 ~ 99238258 (+) True G210823
TU239134 other downstream 1627667 99720179 ~ 99721983 (+) True G210983

Expression Profile