RNA id: LOC118944227



Basic Information


Item Value
RNA id LOC118944227
length 109
RNA type mRNA
GC content 0.30
exon number 1
gene id LOC118944227
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98908962 ~ 98909070 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACCATttttccaaaataaaataaatctgttcttatcagtttaatatctgatatgTCCTCTATCTGGGGACAATATATGAAATGGATTTTTCCACGGTCAAGTAGGTTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU238745 lncRNA downstream 67046 98835671 ~ 98841916 (-) True G210656
TU238813 lncRNA downstream 98959 98809799 ~ 98810003 (-) True G210710
TU238810 lncRNA downstream 121931 98786626 ~ 98787031 (-) True G210707
TU238809 lncRNA downstream 122502 98785611 ~ 98786460 (-) True G210706
TU238754 lncRNA downstream 123399 98784328 ~ 98785563 (-) True G210665
TU238832 lncRNA upstream 866 98909936 ~ 98910293 (-) True G210728
TU238834 lncRNA upstream 23886 98932956 ~ 98955541 (-) False G210730
TU238835 lncRNA upstream 23886 98932956 ~ 98933448 (-) True G210730
TU238843 lncRNA upstream 54681 98963751 ~ 98964109 (-) True G210738
TU238862 lncRNA upstream 107643 99016713 ~ 99016971 (-) True G210757
XM_036960543.1 mRNA downstream 10838 98895268 ~ 98898124 (-) True LOC110510475
XM_036960550.1 mRNA downstream 10841 98895140 ~ 98898121 (-) False LOC110510475
XM_036960558.1 mRNA downstream 10842 98895181 ~ 98898120 (-) False LOC110510475
XR_005039209.1 mRNA downstream 16819 98876074 ~ 98892143 (-) False LOC118943884
XM_036960538.1 mRNA downstream 16819 98876303 ~ 98892143 (-) False LOC118943884
XM_036960562.1 mRNA upstream 4945 98914015 ~ 98921036 (-) False LOC118943885
XM_036960568.1 mRNA upstream 9026 98918096 ~ 98921035 (-) False LOC118943885
LOC118944228 mRNA upstream 22808 98931878 ~ 98931986 (-) True LOC118944228
XM_036960525.1 mRNA upstream 27713 98936783 ~ 98944011 (-) False LOC118943882
XM_036960526.1 mRNA upstream 27713 98936783 ~ 98944041 (-) False LOC118943882
TU238041 other downstream 763445 98144320 ~ 98145517 (-) True LOC118936884
TU237655 other downstream 1289750 97618859 ~ 97619212 (-) True G209841
TU237607 other downstream 1406568 97501172 ~ 97502394 (-) True G209802
TU237272 other downstream 1491774 97416821 ~ 97417188 (-) True G209560
TU236221 other downstream 2486738 96421866 ~ 96422224 (-) True G208658
TU238753 other upstream 9378 98918448 ~ 98946069 (-) True LOC118943885
TU238756 other upstream 33404 98942474 ~ 98943797 (-) True LOC118943882
TU238870 other upstream 116662 99025732 ~ 99026118 (-) True G210765
TU239331 other upstream 214163 99123233 ~ 99123658 (-) True G211127
TU239562 other upstream 706606 99615676 ~ 99615914 (-) True LOC118936886