RNA id: LOC118944228



Basic Information


Item Value
RNA id LOC118944228
length 109
RNA type mRNA
GC content 0.30
exon number 1
gene id LOC118944228
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98931878 ~ 98931986 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACCATttttccaaaataaaataaatctgttcttatcagtttaatatctgatatgTCCTCTATCTGGGGACAATATATGAAATGGATTTTTCCACGGTCAAGTAGGTTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU238832 lncRNA downstream 21585 98909936 ~ 98910293 (-) True G210728
TU238745 lncRNA downstream 89962 98835671 ~ 98841916 (-) True G210656
TU238813 lncRNA downstream 121875 98809799 ~ 98810003 (-) True G210710
TU238810 lncRNA downstream 144847 98786626 ~ 98787031 (-) True G210707
TU238809 lncRNA downstream 145418 98785611 ~ 98786460 (-) True G210706
TU238834 lncRNA upstream 970 98932956 ~ 98955541 (-) False G210730
TU238835 lncRNA upstream 970 98932956 ~ 98933448 (-) True G210730
TU238843 lncRNA upstream 31765 98963751 ~ 98964109 (-) True G210738
TU238862 lncRNA upstream 84727 99016713 ~ 99016971 (-) True G210757
TU238865 lncRNA upstream 86161 99018147 ~ 99018442 (-) True G210760
XM_036960562.1 mRNA downstream 10842 98914015 ~ 98921036 (-) False LOC118943885
XM_036960568.1 mRNA downstream 10843 98918096 ~ 98921035 (-) False LOC118943885
LOC118944227 mRNA downstream 22808 98908962 ~ 98909070 (-) True LOC118944227
XM_036960543.1 mRNA downstream 33754 98895268 ~ 98898124 (-) True LOC110510475
XM_036960550.1 mRNA downstream 33757 98895140 ~ 98898121 (-) False LOC110510475
XM_036960525.1 mRNA upstream 4797 98936783 ~ 98944011 (-) False LOC118943882
XM_036960526.1 mRNA upstream 4797 98936783 ~ 98944041 (-) False LOC118943882
LOC118944200 mRNA upstream 17922 98949908 ~ 98950121 (-) True LOC118944200
LOC118944229 mRNA upstream 22145 98954131 ~ 98954239 (-) True LOC118944229
XM_036960574.1 mRNA upstream 27042 98959028 ~ 98967298 (-) True LOC110500849
TU238041 other downstream 786361 98144320 ~ 98145517 (-) True LOC118936884
TU237655 other downstream 1312666 97618859 ~ 97619212 (-) True G209841
TU237607 other downstream 1429484 97501172 ~ 97502394 (-) True G209802
TU237272 other downstream 1514690 97416821 ~ 97417188 (-) True G209560
TU236221 other downstream 2509654 96421866 ~ 96422224 (-) True G208658
TU238756 other upstream 10488 98942474 ~ 98943797 (-) True LOC118943882
TU238870 other upstream 93746 99025732 ~ 99026118 (-) True G210765
TU239331 other upstream 191247 99123233 ~ 99123658 (-) True G211127
TU239562 other upstream 683690 99615676 ~ 99615914 (-) True LOC118936886
TU239603 other upstream 778715 99710701 ~ 99713563 (-) False LOC110502568