Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241892 |
| length | 1430 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC110502669 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 102038038 ~ 102167821 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0006811 | ion transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241933 | lncRNA | upstream | 47087 | 102117356 ~ 102118240 (+) | True | G213031 |
| TU241899 | lncRNA | upstream | 124557 | 102040231 ~ 102040770 (+) | True | G212999 |
| TU241855 | lncRNA | upstream | 186589 | 101978477 ~ 101978738 (+) | True | G212958 |
| TU241783 | lncRNA | upstream | 306525 | 101858563 ~ 101858802 (+) | True | G212898 |
| TU241770 | lncRNA | upstream | 316274 | 101848624 ~ 101849053 (+) | True | G212885 |
| TU241952 | lncRNA | downstream | 9455 | 102176211 ~ 102176457 (+) | True | G213050 |
| TU241967 | lncRNA | downstream | 27233 | 102193989 ~ 102199459 (+) | True | G213064 |
| TU241969 | lncRNA | downstream | 32838 | 102199594 ~ 102199929 (+) | True | G213065 |
| TU241971 | lncRNA | downstream | 36915 | 102203671 ~ 102211768 (+) | True | G213066 |
| TU242007 | lncRNA | downstream | 120757 | 102287513 ~ 102287787 (+) | True | G213102 |
| XM_036961212.1 | mRNA | upstream | 469843 | 101634630 ~ 101695484 (+) | True | LOC110516669 |
| XM_036961196.1 | mRNA | upstream | 794153 | 101345285 ~ 101371174 (+) | True | best1 |
| XM_036934544.1 | mRNA | upstream | 1200541 | 100929368 ~ 100964786 (+) | True | LOC110501031 |
| XM_036934538.1 | mRNA | upstream | 1306065 | 100848174 ~ 100859262 (+) | False | LOC118936893 |
| XM_036961073.1 | mRNA | upstream | 1316986 | 100785531 ~ 100848341 (+) | True | LOC110502612 |
| XM_036961240.1 | mRNA | downstream | 17603 | 102184359 ~ 102238260 (+) | True | LOC110501421 |
| XM_021578996.2 | mRNA | downstream | 95361 | 102262117 ~ 102278883 (+) | True | LOC110501429 |
| XM_036961261.1 | mRNA | downstream | 140741 | 102307497 ~ 102314434 (+) | True | LOC110501451 |
| XM_036934571.1 | mRNA | downstream | 433862 | 102600618 ~ 102608333 (+) | True | LOC118936918 |
| XM_036961282.1 | mRNA | downstream | 516066 | 102682822 ~ 102721240 (+) | False | slc24a1 |
| TU241742 | other | upstream | 419353 | 101742899 ~ 101745974 (+) | False | G212863 |
| TU241479 | other | upstream | 608957 | 101554385 ~ 101556370 (+) | False | G212690 |
| TU241478 | other | upstream | 609608 | 101554424 ~ 101555719 (+) | False | G212690 |
| TU241455 | other | upstream | 649223 | 101509760 ~ 101516104 (+) | True | G212674 |
| TU241453 | other | upstream | 654485 | 101509760 ~ 101510842 (+) | False | G212674 |
| TU241953 | other | downstream | 10653 | 102177409 ~ 102177918 (+) | True | G213051 |
| TU241958 | other | downstream | 71547 | 102238303 ~ 102239540 (+) | True | G213055 |
| TU242123 | other | downstream | 347451 | 102514207 ~ 102516302 (+) | True | G213185 |
| TU242175 | other | downstream | 428775 | 102595531 ~ 102599866 (+) | True | G213221 |
| TU242668 | other | downstream | 512619 | 102679375 ~ 102680096 (+) | True | G213645 |
