Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118215 |
| length | 514 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G105001 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1538977 ~ 1540210 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118208 | lncRNA | upstream | 23936 | 1514533 ~ 1515041 (+) | True | G104999 |
| TU118203 | lncRNA | upstream | 24732 | 1512292 ~ 1514245 (+) | False | G104997 |
| TU118204 | lncRNA | upstream | 24732 | 1512292 ~ 1514245 (+) | False | G104997 |
| TU118206 | lncRNA | upstream | 24732 | 1512292 ~ 1514245 (+) | True | G104997 |
| TU118196 | lncRNA | upstream | 45954 | 1492302 ~ 1493023 (+) | True | G104992 |
| TU118227 | lncRNA | downstream | 45447 | 1585657 ~ 1588473 (+) | True | LOC118937327 |
| TU118229 | lncRNA | downstream | 49385 | 1589595 ~ 1591453 (+) | True | G105014 |
| TU118238 | lncRNA | downstream | 57376 | 1597586 ~ 1597987 (+) | True | G105019 |
| TU118240 | lncRNA | downstream | 57975 | 1598185 ~ 1599210 (+) | False | G105020 |
| TU118241 | lncRNA | downstream | 58511 | 1598721 ~ 1599541 (+) | False | G105020 |
| XR_005034581.1 | mRNA | upstream | 112700 | 1424316 ~ 1426277 (+) | False | LOC118937323 |
| XR_005034582.1 | mRNA | upstream | 112700 | 1424316 ~ 1426277 (+) | False | LOC118937323 |
| XM_036934986.1 | mRNA | upstream | 148041 | 1309202 ~ 1390936 (+) | False | tgfbr2b |
| XM_036934979.1 | mRNA | upstream | 307442 | 1023461 ~ 1231535 (+) | True | rbms3 |
| XM_036935034.1 | mRNA | downstream | 30100 | 1570310 ~ 1573421 (+) | False | LOC118937324 |
| XM_036935045.1 | mRNA | downstream | 30341 | 1570551 ~ 1573421 (+) | False | LOC118937324 |
| XM_036935038.1 | mRNA | downstream | 30371 | 1570581 ~ 1573421 (+) | False | LOC118937324 |
| XM_036935050.1 | mRNA | downstream | 30371 | 1570581 ~ 1573421 (+) | True | LOC118937324 |
| XR_005034596.1 | mRNA | downstream | 47972 | 1588182 ~ 1588650 (+) | False | LOC118937327 |
| TU118057 | other | upstream | 186114 | 1309278 ~ 1352863 (+) | True | tgfbr2b |
| TU117843 | other | upstream | 385228 | 1153061 ~ 1153749 (+) | True | G104761 |
| TU116937 | other | upstream | 666462 | 860506 ~ 872515 (+) | False | cmc1 |
| TU118276 | other | downstream | 158863 | 1699073 ~ 1700431 (+) | True | G105036 |
| TU118283 | other | downstream | 168759 | 1708969 ~ 1710557 (+) | True | G105042 |
| TU119728 | other | downstream | 980506 | 2520716 ~ 2527972 (+) | True | G106019 |
| TU119854 | other | downstream | 1177751 | 2717961 ~ 2718525 (+) | True | G106122 |
| TU120020 | other | downstream | 1434613 | 2974823 ~ 3039475 (+) | True | G106240 |
